Dr. Bagci has published numerous studies in informatics of radiology spanning from development of computer aided diagnosis systems for infectious diseases to general image analysis techniques in MRI, CT, PET, and histology images, and development of image enhancement and reconstruction methods both in clinical, pre-clinical, and technical fields [11-65]. His works appeared in top-tier journals such as Nature Communications, IEEE Transactions on Medical Imaging, Journal of Virology, Journal of Pathology, and MICCAI. Related to tasks of specific aim 2 and 3, Dr. Bagci published two important contributions in the field where he has shown the importance of inhomogeneity correction, denoising, and intensity standardization of MR images and its effects in image segmentation and registration tasks [61, 63]. Similar post-processing framework that were presented in [61, 63] for MR images will be implemented in Task 2-1. A representative MR images with the correction steps are illustrated in Figure 2 below.
Figure 2. This figure explains post-processing filtering (ordered) for cleaning MR images prior to any quantification task. First row indicates unprocessed MR images. Second row shows intensity inhomogeneity corrected images corresponding to first row images. Third row denotes intensity standardization as applied to second row (inhomogeneity corrected images).
Diffusion MRI and Fetal Brain Connectome (PI: Dr. Yap)
Dr. Yap has made significant contributions to advancing
Poor hand hygiene - spread of germs from one patient to another or spread for hands to surfaces.
Bloodborne Pathogens are pathogenic microorganisms that can eventually cause disease. They are found in human blood and other bodily fluids such as synovial fluid, semen, vaginal secretions, cerebrospinal fluid and any other fluid that mixes or has contact with blood. The bloodborne pathogens are pathogenic, which means they are disease causing, and they are also microorganisms, which means that they are very small so the human eye cannot see them.
However, everybody who has contact with the patient or the environment is entitled to relevant information that will enable them to reduce the risks of transmission to
1.1: Employees rights and responsibilities in the relation to the prevention and control of infection are to follow company’s policies and procedures, keep themselves safe and others, report any hazards which could lead to infection, attend relevant courses, use the PPE provided, keeping the work environment clean and tidy and to maintain good personal hygiene
All MR images were evaluated in T2WI and DWI for site, size, and signal intensity of the
Every year a familiar scene plays out in clinic waiting rooms, chairs filled with miserable patients waiting to see their physician with complaints of a never ending cough and a constant nasal drip. More than likely, these patients will receive a prescription for antibiotics, but should they? Most acute respiratory tract infections (ARTIs), do not require an antibiotic, the symptoms will resolve themselves over time without antibiotic treatment. Healthcare experts and scientists have warned the public about the dangers of overusing antibiotics, and there are thousands of studies to support that fact, but no one is listening. Patients are convinced they need to have antibiotic treatment, and somehow their time is wasted if they leave empty
Combination of calculated ADC values from tumoral core and specific metabolite ratios obtained by MR spectroscopy add more information to MR imaging in the differentiation and grading of brain tumors and more useful together than each alone. Magnetic resonance spectroscopy imaging has superior diagnostic performance in diagnosis of glioma grades compared with diffusion weighted imaging (DWI)
Infection is the invasion and growth of microorganisms such as bacteria, viruses, and parasites that are not normally present within the body. A prokaryotic cell is a simple cell that does not have a nucleus. One of the most common types of prokaryotic cells is a bacterium. Bacteria are differentiated by many factors including shape, chemical composition, nutritional requirements, biochemical activities, and sources of energy (Tortora 76). A patient with an infection in the upper respiratory system will need to have a sputum sample sent to the lab for further evaluation to determine the cause in order to accurately treat the infection. While many microorganisms can be the cause of infection,
Humans are lucky because they have an amazing system for fighting and clearing infectious agents from their bodies. There are many ways in which the immune system, my nemesis, fights off infections to return the human back to his original healthy state. While the immune system may be smart, I am smarter. Infectious agents, like myself, are continuously developing new ways to evade the human’s immune system. Today, I will give you a glimpse into my life and walk you through how I enter the body and evade the ever-present surveillance of the immune system.
In a postprocessing step, acquired MRI data were exported to a remote workstation and data analysis commenced off-line, using a customized MATLAB program (R2014b; MathWorks). With this procedure, the water and fat images could be calculated, which were further used for SAT and VAT segmentation.
Clinical decision-support systems (CDSS) apply best-known medical knowledge to patient data for the purpose of generating case-specific decision-support advice. CDSS forms the cornerstone of health informatics research and practice. It is an embedded concept in almost all major clinical information systems and plays an instrumental role in helping health care achieve its ultimate goal: providing high quality patient care while, at the same time, assuring patient safety and reducing costs. This computer based systems designed to impact clinician decision making about individual patients at the point in time that these decisions are made. If used properly, CDSS have the potential to change the way medicine has been taught and
Magnetic Resonance Imaging, or commonly known as MRI, is a technique used in medicine for producing images of tissues inside the body. It is an important diagnostic tool because it enables physicians to identify abnormal tissue without opening the body through surgery. MRI lets physicians see through bones and organs. MRI does not expose the patient to radiation, unlike tests that use X-rays. MRI provides an unparallel view inside the human body. It is the method of choice for the
Last of the diagnostic imaging tools is the MRI. MRI, which stands for Magnetic Resonance Imaging, was a technique developed in the 1950?s by Felix Bloch, and is the most versatile, powerful, and sensitive tool in use. The process of MRI was originally called NRI, Nuclear Resonance Imaging, but was found to be to confusing due to the fact that MRI?s don?t use radioactivity and ionizing radiation. The MRI generates a very powerful electromagnetic field, which allows the radiologist to generate thin-section images of any part of the body. Also it can take these images from any direction or angle, and is done without and surgical invasion. Another plus side to the MRI is the time it takes to perform, where as a CAT scan may take 30-60 min. A MRI may only take 15 minutes max. The MRI also creates ?maps? of biochemical compounds within a cross-section of the body. These maps give basic biomedical and anatomical information that provides new knowledge and may allow early diagnosis of many diseases.
A number of computer based information systems with diagnostic capabilities have been developed for medicine. Quick Medical Reference (QMR) is a widely used program. Here are the key features of QMR and report on their study of its effectiveness as a diagnostic tool. After investigating how frequently the correct diagnosis would appear among the 5 highest ranked diagnoses generated by QMR. QMR is a computer program for internal medicine. It can generate a differential diagnosis from clinical information entered into its program, offer information on over 600 diseases, describe associated disorders and complications of diseases, offer strategies to confirm or exclude disorders, and provide simulated cases for educational purposes.
Modern medicine has undergone major advancements over the past years. One of these developments include the capacity to retrieve crucial information about the human body and its health beyond the use of manual diagnostic techniques. This is referred to as Medical or Diagnostic Imaging.