Mirkin has published on a variety of nanotechnology applications, including; anisotropic nanostructures, programmable nanostructure, dip-pen nanolithography, and spherical nucleic acids. The general goal of his research is to develop analytical technique, bio-diagnostic, and biotherapies that are assisted by nanoparticles. The primary focus of this report will be Professor
Mirkin’s work on bio-therapeutics performed with spherical nucleic acids (SNA’s).
A SNA can be defined as a nanoparticle bound with a dense oligonucleotide (a polymer of 13-25 nucleotides) shell. 5 The nanoparticle core (nanocore) can be made from a variety of materials, such as, gold, silver, cadmium selenide, and ferroferric oxide. The nanocore material maintains its
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They discovered that SNA’s have a high propensity for cellular uptake and are highly stable in cellular environments. 5 SNA’s biological applicability lies in their oligonucleotide shell. Many diseases can be controlled via gene regulation (RNA interference therapeutics). To regulate gene expression, oligonucleotides can be introduced into a cell. Oligonucleotides can then bind complimentary sequence of RNA, inhibiting gene expression. However, free RNA is not easily transported into the cell.
Furthermore, if RNA does enter a cell it is promptly degraded by nucleases. SNA’s offer a solution to this problem. They are readily transported into the cell via scavenger receptors and are immune to nuclease degradation. 3 This relationship is observed because of their dense oligonucleotide shells.
An example of a disease that can be treated with RNA interference therapeutics is glioblastoma.
Glioblastoma is a neurodegenerative disease that is primary side effect is the development of brain tumors. 6 Mirkin and co-worker’s objective was to develop a SNA that could simultaneously regulate oncogenes (genes that code for unregulated cell division) while being fluorescently active. Two nanocore materials were utilized in this study: gold and gadolinium. The surfaces of these nanocores were functionalized with a sequence of nucleic acids that was shown to down regulate the expression of
Bcl2L12-protein, a protein that’s overexpression is an indicator of glioblastoma. This
Also, regulation of proteins occurs at the level of DNA as well as on other levels. In some cells, certain sections of DNA are bundled tight in a mass of proteins, in such a way that no RNA (and thus no protein) can be made from them. This turns off those genes. In other sections, only a few proteins might be keeping the DNA turned off, so that it could quickly be unravelled and used to make proteins.
Then the tRNA molecules link together and transfer the amino acid to the ribosome. An Anticodons pair with a codon takes the
Glioblastoma is the most common and aggressive form of malignant brain cancer in adults. On average, 8 of every 100,000 people in the U.S. are diagnosed with glioblastoma every year – representing approximately 2% of all cancers diagnosed [1]. Glioblastoma tumors form when astrocytes, star-shaped cells which support and protect the brain, re-enter the cell cycle and start to rapidly divide. Because the brain is supported by a large network of blood vessels, tumors grow quickly and are difficult to remove surgically. Present treatments for glioblastoma are limited to surgery, radiation therapy, and chemotherapy; however, despite these interventions tumors are likely to regrow. Consequently, typical survival time following glioblastoma diagnosis is less than 2 years.
D)Nucleic Acids monomer(s) are called nucleotide. The functional group is dna(Deoxyribonucleic acid) and rna(Ribonucleic acid). The linkage type is covalent bonds and hydrogen bonds. The primary function of nucleic acid is to store and transfer genetic material.
In making PNA a prospect for drugs, researchers have demonstrated proof of concept for using PNA oligomers to activated or suppress the transcription, replication, or repair of specific genes by binding DNA is various ways. PNA oligomers and conventional nucleic acids have the same problem of poor bioavailability because they are large water loving molecules making it difficult for them to enter cells. The productions of PNA based drugs awaits the development of suitable chemical modifications or pharmaceutical formulations to improve PNA bioavailability. Researchers believe this is the only thing holding back this medical breakthrough.
charged DNA to bind the positively charged minicolumn. 2 ml of column wash is then used to
The dsRNA can be delivered to the worms in many ways, but in this particular experiment, the bacteria containing plasmid for dsRNA is fed to the worms. The dsRNA is able to move throughout cells in worms by the pore created by SID-1
An abnormality in this process leads to a number of problems, including cancer. MicroRNAs are a type of RNA which inhibit the expression of genes and play a vital role in the development of cancer. Of notable interest is miR-378, as it increases tumor angiogenesis and growth and also enhances the survival of these cells, by decreasing the expression of tumor suppression genes like Sufu. A study testing human cell lines found that when Sufu expression levels were high, miR-378 expression levels were low, and when Sufu levels were low, miR-378 levels were high, showcasing that the two were negatively correlated. Because repression of Sufu can lead to rampant proliferation of cells, the inhibition of Sufu is essential in order for miR-378 to promote angiogenesis and increase cell
Cellular rejection: due to the response of the immune system, since the response is elicited by XNAs.
Gliomas are broad category of brain tumors arising from glial cells. They are the most common primary malignant neoplasms of the central nervous system. They are classified into low-grade (WHO grades I and II) and high-grade (WHO grade III and IV) tumors. Almost 80% of gliomas are astrocytic tumors including Glioblastoma multiforme (GBM). Diagnosis of glioma includes a CT scan/MRI scan and biopsy. These tumors are highly resistant to current treatment modalities including surgery, radiation therapy, chemotherapy, corticosteroids, antiangiogenic therapy, and experimental approaches such as gene transfer, their prognosis is dismal.Malignant gliomas results from a multistep process which involves genetic alterations arised from innate and environmental
Brain cancer is a devastating, hard to treat condition in which a tumor forms within the cranium of a human. It develops when the normal cells experience a mutation that causes the cells to grow and divide at a rapid pace, while killing healthy cells. In result, this rapid growth later develops into a dangerous tumor. The brain is an extremely sensitive section of the human body, brain cancer cannot be treated easily with surgery. Nevertheless, there are many types of brain cancer, and Glioblastoma is a specific, rare brain cancer condition.
The RNA sequence in the anticodon region, as well as other parts of the transfer RNA molecule, are important
In the event that the retargeting of CLAMP and roX2 alone and along with additional factors proves insufficient for MSL recruitment there is a possibility that there may be undiscovered interacting RNA partners required for the targeting of
Castanotto D, Lin M, Kowolik C, Wang L, Ren X-Q, Soifer HS, et al. A cytoplasmic pathway for gapmer antisense oligonucleotide-mediated gene silencing in mammalian cells. Nucleic acids research. 2015;43(19):9350-61.
Nanotechnology, which is one of the new technologies, is the science and technology of designing, constructing and creating of novel nano-scale structure, 1nm to 100 nm in size, with huger quality, novel performance properties, along with fewer defects compared with those of the bulk material (Siqueira et al., 2010). An increasing interest from the scientific community to work with materials in nano metric scale has been observed since the introduction of the concept of nanotechnology by Richard Feynman in 1959. The last decade has seen advancement in every side of nanotechnology such as nano particles and powders, nano layers and coats, electrical, optic and mechanical nano devices, and nano structured biological materials (Bhattacharyya et al., 2009). Nanoscale structures permit the control of fundamental properties of materials without changing the materials’ chemical status (Murphy et al., 2011).