Lab Report 1
Genetic Changes in Populations: The Consequences of Selection
General Biology II Lab
Junyao Li
Introduction
In this lab, we explore the reason genetic changes happened within a population. We use bean-bag model to simulate allele and genotype frequencies for three generations of deer mice under three different selective regimes. Then, we use the Hardy-Weinberg Principle to assess the selection and evolution experienced by deer mice. The Hardy-Weinberg Principle is one of the most important principles in population genetic. G.H. Hardy and W. Weinberg discover it in 1908 independently. Hardy-Weinberg principle states that In a population that is not evolving, allele and genotype frequencies will remain constant from
…show more content…
Through simulation of varies selection pressure, we could gain an accurate assessment of the impact of selection on deer mice. The purpose of this lab is to learn know how selection changes the genetic makeup in a population. We want to know if different selection pressure would affect genetic makeups in deer mice population. We hypothesized that as selection pressure increase, the frequency of pale coat color deer mice within a population will decrease, and the speed of evolution for the population will increase. Darwin’s natural selection theory, which states that nature would select those who have best adaptation to their environments, lead us to predict that dark coat color deer mice would have better adaptation to their dark habitat, and thus would survive better.
Methods This lab was conducted in Merritt College on June 22, 2015. We use blue color bean to represent dominant allele D, and red color bean to represent recessive allele d. We conduct three simulations, each of which has different selection pressure. We begin each simulation with 100 alleles sample that are randomly drawn form a large gene pool. For the first simulation, there is 0% selection against pale coat color deer mice. We randomly draw two beans out of the 100 alleles sample, and record the genotypes of these two beans on a tally sheet. Then, we put
The Rock Pocket Mouses’ coat color is extremely important because the mice use it as a mean of camouflage if the mice are a different color of fur than its environment, their overall fitness, how well an organism can survive and reproduce in its environment, decreases. Due to a volcanic eruption, most of the environment has turned from a sandy-colored soil to black soil; therefore making it very difficult for the unmutated, pale mice to survive. The dark fur color of the Rock Pocket’s population occurred due to a random mutation, a mistake made in the DNA whether it is good or bad, known as the MC1R gene. Because of this, variation among the mice was created, making some mice dark-colored and others to stay light-colored. Dark-colored mice
In order for natural selection to take effect with coat coloration of rock pocket mice that live on New Mexico’s Valley of Fire’s lava flows, conditions were met that are necessary and sufficient for evolutionary change. These conditions relate with variation. With variation, the coats of the mice must be heritable, and have a distinctive mortality (Study Week 4). The variation occurs here with the two different colours of fur; dark and light. These colours came from slightly different genes over time that controls their pigment. This mutation has heritability because the dark mice coat has enough of an advantage for staying alive that their offspring had more offspring and so on; eventually leading to natural selection weeding out the mice
Theories of evolution have been created by many people. As more theories come along, we can identify that genetics is related to evolution. Rodents that are immune to effects of poison warfarin are called “super mice”, which are thought to be influenced by evolution. This poison is now no longer as effective as it once was. In this report, the theories of transformation by Lamarck and natural selection by Darwin are explored to provide a recommendation for which theory best supports how super mice came around.
The results of this simulation are a demonstration of natural selection since the data showed that as each generation passed, hairless bunnies which have have the recessive allele trait started to become extinct. This proves that the environment easily triggered natural selection into making sure the bunnies have fur in order to
Biological evolution, gene-based changes in a population that is inherited over time, (Hull, 2001:53) is dependent on biological variation within a population in order to come about. The biological variation within a population is the utmost necessity to ensure that natural selection can occur. It is what enables a species to withstand environmental pressures, as they are not all similar, and each organism within a population has its own unique probability to survive in the
Michael Nachmann, from the University of Arizona, was fascinated with the fact that he can look into the animals' genes and discover the genes which are responsible for the evolution of one animal species to the other. In the Pinacate Desert of Arizona, rock pocket mouse are easy pickings for predators which are foxes, coyotes, owls an rattlesnakes; unlike other organisms, the rock pocket mouse’s defence mechanism is camouflage – a protective coloration that some animals use to blend into their environment in order to avoid being seen by predators. The Pinacate Desert’s environment is not entirely uniform – a part of the desert is dominated by light rocks while other parts of the desert are full of dark rocks. Similar to Darwinian concept of evolution, the mice, which have light fur, that thrive on areas dominated by dark rocks have evolved a dark-colour fur. So, Nachmann look into the DNA of the mice in light of determining the reason behind the evolution of mice. According to Nachmann’s findings, a mutation has occurred in the DNA of the mice which is responsible in the change of fur colour of the mice living in areas full of dark lava and
With natural selection depending on the environment conditions, the phenotype confers can advantage or disadvantage the the indicidual with the phenotype relative to the other phenotypes in the popultion. If it is an advantage, then the individual will most likely have more offsprings that the individuals with the other phenotypes, and this will mean the the allele behind the phenotype will have greater representation in the next generation.
Three examples of this can be counterfactual accounts, manipulability accounts, and a controlled experiment account, but only two will be discussed in further detail (Millstein, 2006). For each example heritable difference in physical traits can be seen, along with notable differences in the reproductive success, as well (Millstein, 2006). Counterfactual accounts show heritable differences and how these differences are not altered by the differences in the reproductive rates (Millstein, 2006). In this instance natural selection would favor the counterfactual account because there were no heritable differences in characteristics among individuals in the population (Millstein, 2006). If this is the case it would mean that natural selection had nothing to favor, and all of the organisms in the population would have the same genotypes, according to this model (Millstein, 2006). The manipulability account involves changing the heritable difference of the organisms within the population (Millstein, 2006). If this was done, then there would be a visible change in the reproductive success of the individuals (Millstein, 2006). With the example of the beetles studied in this particular case, they were trying to withstand different temperatures that the scientists subjected them to (Millstein, 2006). From this experiment a new beetle genotype emerged and could withstand a broader range of temperatures compared to the previous generations (Millstein, 2006). Since this occurred, according to the model, there would be an expected decrease in the reproductive rate of these particular beetles with the new genotype (Millstein,
The Hardy-Weinberg equilibrium is used like a punnett square to see if genotype frequencies in a population remain constant from generation to generation.
Evolution is the process by which an organism branches off from an ancestor and changes due to modifications caused by natural selection, mutation, genetic drift, and gene flow. In the case of the squirrel population a dominant long tooth gene came about. Depending on whether the long tooth trait is favored in the environment will determine what happens to the litter of squirrels. Suppose the gene is favored, this would give the litter of squirrels an advantage over the others when it came to either getting more mates or having more success on getting different types of food. This would eventually change the allelic frequencies and over generations make the long tooth gene an advantageous trait. However, if having long teeth is a disadvantage
What Darwin Never Knew (2009) mentions a few examples of how Darwin’s theory influenced their studies. Michael Nachman of the University of Arizona concluded that natural selection was present in pocket mice of the Pinacate Desert – gene mutations gave mice living in the sandy desert tan fur, whilst the mice that lived on darker rocks had black fur.
Presently, the interest for selection of animal have been rejuvenated towards the theory of multilevel selection (Okasha, 2006; West et al. 2008; Gardner and Grafen, 2009; Nowak et al. 2010; Lion et al. 2011; Frank, 2013). From time being debate has been going on to whether or not selection can operate at multiple levels because of the confusion that arises due to the presence of weak individuals at the group levels but with respect to time the individual might show much stronger notion of adaptation at the different level (Wilson and Wilson, 2007; Gardner and Grafen, 2009). Although, now the social evolution theorists had also widely accepted that a covariance between group trait and fitness may arise due to response
The Theory of Natural Selection was first proposed by Charles Darwin in his work titled On the Origin of Species by Means of Natural Selection or the Preservation of Favoured Races in the Struggle for life published in 1859. Darwin’s theory states that because of competition for finite resources within a habitat individuals must compete for survival and those more adapted to their specific environments have a greater success in surviving to maturity which enables them the opportunity to successfully reproduce. Individuals that successfully reproduce will pass down to their offspring the traits that gave then an advantage in survival to maturity and over long periods of time this can cause transformation within a species. (Houk 2013: 2-2) In
In the 20th century, with the development of the science of genetics biologists began understanding the mechanics of how traits are passed down to different generations and how they are altered through the discovery of DNA and its major importance. They learned that parts of DNA from each parent are passed down to the offspring. Mutations of DNA, which cause alterations of species, can also occur when traits are being passed down to the offspring. Mutations in DNA can cause the offspring to have difficulties surviving and eventually lead to the extinction of the species. On the other hand, mutation of DNA can affect the offspring positively and change its traits to be stronger and a better survivor in that certain environment which would eventually lead to a growth in population of the certain species. Mutations in DNA can also be neutral and have no effect of the offspring’s traits. This battle with nature and survival through DNA lead to the foundation of the idea of Natural Selection (Alberto 2008).
Although the definition of relative fitness is simple, the mathematical relationship between absolute and relative fitness is subtle (Bazykin, 1969; Betzig, 1986 and Beatty, 2008). In particular, there is a curve of diminishing returns between these two quantities i.e., increasing the absolute fitness of a genotype by some amount has less effect on relative fitness (compared with the mean relative fitness) than does decreasing the relative fitness of the genotype by the same amount. The importance of mathematical implication of fitness is straightforward i.e., when zygotes attempt to mature, selection acts, killing some. Because a proportion (W1) of A1 individuals and a proportion (W2) of A2 individuals survive, the proportion of individuals that carry A1 after selection acts is