Nanodiscs modulates A1-40 fibrillation Biological membranes were shown to modulate the A1-40 aggregation and pathways depending on their physical and chemical properties. Here, we observed the effect of membrane variable nanodiscs in modulating the kinetics of A1-40 using ThT fluorescence dye. The formation of nanodiscs with different lipid compositions were achieved by varying the lipid to PMA concentration (see methods). The DLS measurements ensures a hydrodynamic diameter ranging from ~ 7 to 12 nm for the targeted nanodisc systems (Fig 1a). For a comparative analysis and as per the suitability of PMA for nanodisc formation, we used the 1,2-dimyristoyl-sn-glycero-3 lipids for our analysis. To formation of nanodiscs by PMA is further …show more content…
We observed some atypical ThT fluorescence curves with multiple peaks for few nanodisc systems as shown in Fig 1c at low lipid concentration. We speculated a possible structural rearrangement of A fibers (disintegration) occur after binding to nanodiscs resulting in the ThT quenching during the reaction due to an inherent nature of off pathway unstable protofibers and/or oligomers. Rapid sheet induction in A1-40 by Nanodiscs The secondary structural transition of A1-40 form a random coil conformation to a metastable sheet structure during self-seeding reaction is a ubiquitous phenomenon. Here, we investigated the effect of nanodiscs on the conformational change of A1-40 at variable lipid composition and concentration. The CD spectra of A1-40 showed its rapid transition from a random coil to sheet conformation irrespective of the membrane composition in the nanodisc system (Fig 2a). Current therapeutic strategies in AD focus on the inhibition of toxic oligomer intermediates of A1-40 which typically shows a mixed conformation (ref). Our CD results showed a typical sheet conformation for A1-40 that corresponds to a matured fiber structure (Fig 2a). However, the ThT results of the corresponding titration (Fig 1c) showed inhibition of A1-40 aggregation and amyloid fiber
Some proteins even have 3-dimensional shaping caused by disulfide bridges, ionic bonds, and van der Waals interactions. Within the folds of
Voltage gated sodium channels are fundamental players in animals physiology. By triggering the depolarization of the lipid membrane they enable generation and propagation of the action potential. The involvement of these channels in numerous pathological conditions makes them relevant target for pharmaceutical intervention. Therefore, modulation of sodium conductance via small molecule binding constitutes a promising strategy to treat a large variety of diseases. However, this approach entails significant challenges: voltage gated sodium channels are complex nanomachines and the details of their workings have only recently started to become clear. Here we review ¬¬– with emphasis on the computational studies – some of the major milestones in the long-standing search of a quantitative microscopic description of the molecular mechanism and modulation of voltage-gated sodium channels.
This is because inhibition of fibril-dependant secondary nucleation can prevent neurotoxin production and possibly be used as immunotherapy for neurodegenerative disease treatment. To carry out the experiment amyloid-B 42 residue was purified, as the monomer and fibril were isolated. Single-chain antibody fragments (scFvs) were selected with a high affinity for AB42 fibrils. Affinities were measured with surface plasmon resonance. They finally used kinetic screening and analyzed using microscopy. From this, they identified four single-chain antibody fragments that specifically inhibit the fibril-dependant secondary nucleation. They also suggested from this that Hydrogen bonding is important in fibril binding specificity. These experiments were In vitro only, therefore in vivo work should be done to see any off-target effects or determine therapeutic efficiency. This work can be further applied for immunotherapy treatment development for various neurodegenerative
The bipolar nature of lipids permits self-assembly but also authorizes free diffusion polar solutes. As the chain length of the hydrocarbons decreases, permeability increases to allow larger ionic substances through the membrane. The short-chain monocarboxylic acids demonstrated the ability to contain polymeric macromolecules products but also grant entry of large ionic molecular reactants such as ADP. Although short-chain amphiphiles are less stable, the permeability properties of these vesicles allows essential exchange between the external environment and the microenvironment that permits internal
My work this semester involved the continued study of the rhodamine spirolactam derivative that I synthesized in the previous semester. This rhodamine derivative is a photoactivateable dye, and exposure to 405 nm light converts the closed form of the dye to a fluorescent open form (Figure 1). This open form can then be excited with green light (510-565 nm) to observe fluorescence emission in the range of 570-650 nm1. An interesting additional consideration is the effect of pH on the stability of the open form, as the open form reverts to the closed form over time and thus becomes non-fluorescent at neutral pH. Typically, the lifetime of the open state is on the order of a few milliseconds, but it is reported that the under appreciably acid conditions this lifetime is greatly (and possibly indefinitely)
To answer the questions previously asked, Lee et al conducted an experiment using several methods, which include fluorescence resonance energy transfer (FRET), two-photon microscopy, photostimulation, and
Nanoparticles have a series of advantages, such as relatively high drug loading, stability in the body fluids and storage conditions, slow controlled release and targeting effect, and easily industrialized production,and they have thereforebecome the hot spot of brain targeted research [14, 15]. Nanoparticles could carry drugs through the BBB and act in the CNS; especially after surface modification they can avoidphagocytosis by thereticuloendothelial system to make drugs available through the BBB and significantly improve the concentration of drugs in the brain, which is becoming an important research field of the basic researchand application of drug delivery
Budding of a membrane domain and formation of a narrow neck are consequences of line tension and the need to reduce the length of the energetically unfavourable domain boundary. Deformation of the lipid molecules in opposing monolayers is present, with lipids in the outer monolayer adopting an extended conformation, whereas those in the inner monolayer become compressed and splayed. Thinning at the neck is driven by the formation of lipid microdomains and the accumulation of lipids with negative spontaneous curvature in the most deformed and thinnest parts of the neck. This decrease the barrier for transformation into a hemifission intermediate. Molecular dynamics simulations of membrane fusion events have shown that accumulation of tilted lipids in the contact zone results in the formation of a stable stalk like
Physical permeation enhancement may be superior in delivering hydrophilic and macromolecular agents (Murthy et al., 2007b).
The misfolding proteins can lead to many different diseases for human bodies. So, it’s important to prevent or disrupt the pathways to a misfolded protein. To do so, we first need to understand the function of protein folding, amyloid fibril as well as alpha helix, beta sheets, Aβ , and α-Synuclein…how they affected the structures of each protein in certain diseases. Then, it would be a good fundamental tool that may lead to the development for treating diseases. However, the challenge in developing treatment to prevent the misfolding disorders is identifying the ideal stage at which the protein misfolding and subsequent aggregation can be disrupted. For example, Alzheimer’s Disease, treatment methods for AD, we need to develop of protease inhibiters aimed at stopping the Amyloid beta release and prevent the aggregation of
In 1987, Douglas Prasher was the first person to recognize the potential for Green fluorescent protein to be utilized as a tracer molecule. Due to proteins being extremely small and unseen even under electron
Span 60 has relatively low HLB with small critical packing parameter(CPP). So, it requires only a small amount of cholesterol to obtain the optimum membrane curvature for vesicle formation. In return, Tween 60 require considerably large amounts of cholesterol to obtain suitable entire CPP values due to high hydrophilicity with high
Cancer claims more than half a million lives in the United States every year (National Cancer Institute). Cancer is commonly perceived to be a fatal illness that leads to a slow death. Many cancer patients have little or no hope when they are diagnosed with this devastating disease. However, there is a new breakthrough in combating cancer. This new strategy has brought renewed hope to millions of patients. Nanotechnology is the newest weapon in the war waged against cancer. Nanotechnology is defined by the National Nanotechnology Initiative as “research and technology development at the atomic, molecular, or macromolecular scale leading to the controlled creation and use of structures, devices, and systems with a length scale of approximately 100 nm”. Nanotechnology presents the potential to be extremely effective in aiding cancer research and treatment. The implementation of nanoparticles is a major development in the field of medicine, and its involvement in the fight against cancer has yielded positive results. Nanotechnology allows for precise targeting of malignant cells, which was a challenge in the past. Some complications remain, but these few can be eliminated through more research. Overall, nanotechnology presents a more safer and practical approach to eradicate tumors. The approach for eliminating cancer in the U.S. should not be surgery, chemotherapy, or radiation therapy; instead, the use of nanotechnology to combat cancer
The interactions between A1-40 and nanodiscs was investigated using ITC measurements. In reference to our CD results which shows a typical sheet conformation in A1-40 in both zwitterionic and anionic nanodiscs, we measured the A1-40 binding kinetics in DMPC (100%) and variable percentage of anionic lipids such as DMPG and GM1. A1-40 was observed to induce an intermediate -helix conformation in presence of anionic lipids such as GM1 and phosphatidylserine and phosphatidylglycerol. Thus, we targeted anionic lipids to examine how the membrane compositions in nanodiscs affects the binding kinetics. As shown in Fig 2b, a differential therograms were obtained for A1-40 (20 M) in the targeted
The molecular movement is found to be restricted because of these strong intermolecular forces and typically a monolayer is formed. It takes place at high temperature because the heat of adsorption is high. It is highly specific and irreversible process.