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- Pectin, which occurs in plant cell walls, exist in nature as a polymer of D-galacturonic acid methylated at carbon 6 of the monomer. Draw a haworth projection for a repeating disaccharide unit of pectin with one methylated and one unmethylated monomer unit in a (1-->4) linkagePectin, which occurs in plant cell walls, existsin nature as a polymer of d-galacturonic acid methylated at carbon 6 of the monomer. Draw a Haworth projection for a repeatingdisaccharide unit of pectin with one methylated and one unmethylated monomer unit in a(1 -> 4) linkagePolylysine adopts a random structure in solution at physiological pH (i.e. 7.4). Given that the e-amino group of lysine has a pKa of 10.5, under what circumstances do you think polylysine will form an a-helix? Give an explanation for your decision. Given the pKa of the side-chain COOH group, under what circumstances would you anticipate polyglutamate to form an a-helix?
- Polyglycine, a simple polypeptide, can form a helix with φ = -80°, ψ = +150°. From the Ramachandran plot (as shown), describe this helix with respect to handedness.The ends of eukaryotic chromosomes terminate in a G-rich singlestrandedoverhang that can fold up on itself to form a four-stranded structure. In this structure, four guanine residues assume a hydrogen-bonded planar arrangement with an overall geometry that can be represented as shown below. Draw the complete structure of this “G quartet,” including the hydrogen bonds between the purine bases.In pyrimidine nucleosides, the anti conformation predominates. Explain. Do the purine nucleosides have similar interactions?
- A homopolymer of histidine (polyhistidine) adopts an alpha helix structure at pH 9 but isunfolded at a pH of 4. Explain why using chemical detailsEstimate the length, in nm, of the four identical beta-strands drawn in blue in panel (B) of the image below, if they consists of only the amino residues of the two alpha-helices highlighted in purple in panel (A) of the image below. Assume that the amino acid residues of the two alpha-helices combined were folded in four beta-strands of identical length.Given the polypeptide chain below: Ala-Arg-Val-His-Asp-Gln 1. What kind of polypeptide is it? 2. How many peptide bonds are there?