Given: An integer k and a collection of strings Dna. Return: A k-mer Pattern that minimizes d( Pattern, Dna) over all k-mers Pattern in python code. (If multiple answers exist, you may return any one.) DNA A G G T A C T T C C A T A C G T A C G T T A G T A C G T C C A T C C G T A C G G

Given: An integer k and a collection of strings Dna. Return: A k-mer Pattern that minimizes d( Pattern, Dna) over all k-mers Pattern in python code. (If multiple answers exist, you may return any one.) DNA A G G T A C T T C C A T A C G T A C G T T A G T A C G T C C A T C C G T A C G G

C++ Programming: From Problem Analysis to Program Design

8th Edition

ISBN:9781337102087

Author:D. S. Malik

Publisher:D. S. Malik

Chapter8: Arrays And Strings

Section: Chapter Questions

Problem 24PE

See similar textbooks

Related questions

Q: break a given list of integers into sets of a given positive number.

A: We have to divide a given list into two parts around a given positive number in python

Q: Find out the vowels in a word and print out how many words have the exact same type of vowels.…

A: def value(final): str = "" for i in final: str += i return str def count(val,…

Q: Give a regular expression for the language of all strings over alphabet {0,1} that have exactly…

A: Given: A regular expression for the language of all strings over alphabet {0,1} that have exactly…

Q: In this problem, we are working with binary strings with length K. A binary string contains only…

A: Here is the detailed and simplified C++ code for the above listed problem statement:

Q: Implement the following two functions that allow breaking a string into non-empty tokens using a…

A: Splitting the string into two non empty token using a given delimiter in C program

Q: Let Set A = {the quick brown fox jumped over the lazy dog} be a set of strings (two or more…

A: Here we have given a set A that consist of some string Set A={ the quick brown fox jumped over the…

Q: Given a Python list L of n positive integers, each represented with k = àlog nà + 1 bits, describe…

A: Given :- Given a Python list L of n positive integers, each represented with k = àlog nà + 1 bits,…

Q: Implement the following two functions that allow breaking a string into non-empty tokens using a…

A: Splitting string with delimiter in C programing

Q: Given a list of n positive integers, show that there must two of these integers whose difference is…

A: - We need to show that there must be two integers in a n length list whose difference is divisible…

Q: For any program P that takes as input a string, can P ever solve a language other than Y(P)? If your…

Q: Determine the minimum integer n so that in any set containing n strings of 4 decimal digits there…

A: we have 9 different options for first digit of the 4 digit decimal string: 9 options are :…

Q: (a)Describe a bijection from the set of binary strings of length n to the set of binary strings of…

A: Answer:-

Q: Find a longest common subsequence between following strings: String1= {1, 2, 3, 4, 5, 6, 7, 8}…

A: The Longest Common _Subsequence (LCS) problem is finding the longest _subsequence present in given…

Q: You are given a int[] containing a list of non-negative integers. Find and return the largest one…

A: Let's understand step by step : 1. Declare an array a[] which is an input. 2. Call function find()…

Q: Let L be a set of all finite binary strings that have a pattern 0* l*0³ 1"O* where n > 0 • Design a…

A: The answer is given below:-

Q: Find your own open numerical statement (with the universe of positive integers), P(x, y) and Q(x)…

A: Solution p(x,y) & Q (x) we can assume p(x,y) -> xy Q (x) -> x p(x,y) ->…

Q: Suppose that T(0) = a and T(1) = b are some constants. Define the running pairwise average as, for n…

Q: Let A be the set of binary strings containing exactly two 1s. Let B be the set Question 3. of binary…

A: Answer: I have given answered in the handwritten format in brief explanation

Q: Let Set A = {the quick brown fox jumped over the lazy dog} be a set of strings (two or more…

Q: Write a computer program that produces the desired output from the given input. Input: The number of…

A: Since you are not mentioning the programming language, here we are using C++ to complete the…

Q: Give regular expressions for the i (a) {w : w contains at most two 1s} (b) {w : w contains at least…

A: REGULAR EXPRESSION: Regular Expression refers to a sequence of characters that represents any…

Q: T (n) is taken as the ground state T (1) = 10. For numbers back to T (n + 1) = 2n + T (n), n> = 1.…

A: T (n) is taken as the ground state T (1) = 10. For numbers back to T (n + 1) = 2n + T (n), n> =…

Q: Consider an algorithm for finding the smallest integer in a finite sequence of natural numbers, of…

A: If we try to create an algorithm based on the above problem then it will be like min = arr[0]…

Q: Consider the hex strings A=0xee89e74b88a069db and B=0x2f b6965993e7af84. a) What is A O B in…

A: Given that the hexadecimal strings are: A = 0xee89e74b88a069dbB = 0x2fb6965993e7af84 a) Lets first…

Q: Consider a long list of numbers such that: 15% of the entries are 1; 50% of the entries are 1; 10%…

A: Answer is given below-

Q: A particular random number generator is able to give a bunch of random integers from 0 to 65535. How…

A: Let's see the solution in the next steps

Q: Make a program in Phyton that show the perform function evaluations for Hermite polynomials based on…

A: Note: The program is only given as a solution. Kindly compare the given program by changing the…

Q: Write a program that reads integers, finds the largestof them, and counts its occurrences. Assume…

A: Program: import java.util.Scanner; public class Main { private static int c; private static…

Q: H. Vxx >o I. 3xx =o

A: Algebric expression.

Q: For each of the following pairs of functie ff and gg, circle one of the answers f \in o(g), f \in…

A: Please refer below for your reference:

Q: If a is a symbol and n > 0, then an denotes a···a, or in words, the string of length n consisting of…

A: If a is a symbol and n > 0, then an denotes a···a, or in words, the string of length n consisting…

Q: Consider the hex strings A=0x09a364 fd83608d2c and B=0xd09d4a09cba24e45. a) What is A B in…

A: we have to hex string we have to find the xor of both the hex strings

Q: Find the smallest r such that 0,(n) > (log2 n). maxk=[ (log2 n)2]; maxr=Max[3, [(Log2 n)1]; (*maxr…

A: I have solved your question with Explanation please check next steps for solution.

Q: In C language, implement the following two functions that allow breaking a string into non-empty…

A: #include <stdio.h>#include <stdlib.h> // // defination for count_tokensint…

Q: In this problem, we are working with binary strings with length K. A binary string contains only…

A: The median of a multiset is defined as follows: consider the multiset as a sequence sorted in…

Q: Let Set A = {the quick brown fox jumped over the lazy dog} be a set of strings (two or more…

A: Given twо роsitive numbers а аnd n, а mоdulо n (аbbreviаted аs а mоd n) is the…

Q: In this problem, we are working with binary strings with length K. A binary string contains only…

A: Below is the code in C++:

Q: Binary Search? When Jojo was a little kid, his teacher asked him a question. What was the answer of…

A: C language is a system programming language because it can be used to do low-level programming. This…

Q: To show that the set of all finite strings over the alphabet {0,1,2,3} is countable, you would…

A: A set is bijective if and only if each element in the first set is exactly mapped to one and only…

Q: Let A = {m ∈ Z | m ≡ 9 (mod 12)}. Let B = {n ∈ Z | n ≡ 1 (mod 4)}.

A: We are going to prove that set B is not a subset or equal to set A. First find out what is set A and…

Q: Simplitying the Karnoff map below results in? Note that the expression negatio () C АВ 1 1 ĀB АВ АВ…

A: Circuit diagram

Q: We consider certain strings of length 6 over the alphabet S = {A,B,C}. We require that the string…

A: we need to form 6 letter string using A,A,B,B,C,C //exactly two A's,B's,C's lets start with placing…

Q: What is a REGEX of ?L? Design an FA ?

A: ANSWER: REGEX: Regular expressions are extraordinary strings addressing an example to be matched in…

Q: Suppose that T (0) = a and T(1) = b are some constants. Define the running pairwise average as, for…

A: The given recurrence relation is used to figure out the function of T, as shown below. We have,…

Q: Develop Python Code for the following scenarios: Given a list L having N numbers and Q set of…

A: As per the above listed problem statement we are required to develop python code to find out the…

Q: Write a program that takes an integer N and uses the function “np.random.randint(low = 0, high = N)”…

A: As n increases the absolute difference decreases, which is proved by induction over multiple…

Q: If P(x) is a polynomial in x with integer coefficients, let W(P(x)) = number of odd %3D coefficients…

A: Procedure: We have the 2 input Input1 and Input2 from the user use these input defines on the…

Q: How can I find the Fibonacci nth term from the series? Take the n from the user. In the Java…

A: Coded using Java.

Concept explainers

Randomized Select Algorithm

A randomized algorithm is defined as one that uses a certain amount of randomization in its logic or operation. It is said to be an algorithm that depends on the random number to perform its operation. It is used for reducing the overall time complexity, space complexity in the standard algorithm. The randomized algorithm uses the concept of random numbers to find the solutions to the different kinds of problems and also to improve the problem solutions.

Question

Given: An integer k and a collection of strings Dna.

Return: A k-mer Pattern that minimizes d( Pattern, Dna) over all k-mers Pattern in python code. (If multiple answers exist, you may return any one.)

DNA
A G G T A C T T
C C A T A C G T
A C G T T A G T
A C G T C C A T
C C G T A C G G

Expert Solution

This question has been solved!

Explore an expertly crafted, step-by-step solution for a thorough understanding of key concepts.

This is a popular solution!

SEE SOLUTION Check out a sample Q&A here

Step 1

VIEW

Step 2

VIEW

Trending now

This is a popular solution!

Step by step

Solved in 2 steps

SEE SOLUTION Check out a sample Q&A here

Knowledge Booster

Learn more about

Need a deep-dive on the concept behind this application? Look no further. Learn more about this topic, computer-science and related others by exploring similar questions and additional content below.

Similar questions

You are given a string X of length n and another string Y of length m ≤n. Say,the indexes p1, p2, p3, p4 and q1, q2, q3, q4 form two sub-sequences, i.e., 0 ≤ p1 < p2 < p3 < p4 < nand 0 ≤q1 < q2 < q3 < q4 < n; then, they are non-overlapping if p4 < q1.The task is to count the maximum number of non-overlapping sub-sequences of X that are thesame as Y . Thus, if X = GAXTYAWBGTAUGBTABGRGTAXB and Y = GTAB, then the answer is3 as shown by the red fonts. We cannot select the underlined GTAB as it overlaps with a red GTAB(i.e., among overlapping sub-sequences, you can select only one of them).Describe an O(m + n) time algorithm to obtain the count. Write a pseudo-code.
A string S consisting of uppercase English letters is given. In one move we can delete seven letters from S, forming the word "BALLOON" (one 'B' one A, two 'L's, two 'O's and one 'N'), and leave a shorter word in S. If the remaining letters in the shortened S are sufficient to allow another instance of the word "BALLOON" to be removed, next move can be done. What is the maximum number of such moves that we can apply using python
We consider certain strings of length 6 over the alphabet S = {A,B,C}. We require that the string contains exactly two As, and exactly two B's, and exactly two C's. How many such strings are there? That is, how many strings of length 6 over the alphabet {A,B,C} contains exactly two A's, two B's and two C's?
Implement the following function in C programming language that get a string, and compute an array of non-empty tokens of the string containing only lower-case letters. For example: ● For a string "abc EFaG hi", the list of tokens with only lower-case letters is ["abc", "hi"]. ● For a string "ab 12 ef hi ", the list of such tokens is ["ab","ef","hi"]. ● For a string "abc 12EFG hi ", the list of such tokens is ["ab","hi"]. ● For a string " abc ", the list of such tokens is ["abc"]. ● For a string "+*abc!! B" the list of such tokens is empty.That is, we break the string using the spaces as delimiters (ascii value 32), and look only at the tokens with lower-case letters only . The function get_tokens gets a string str, and returns the array with the tokens containing only lower-case letters in the correct order. The length of the array should be the number of tokens, computed in count_tokens. char** get_tokens(const char* str); For example:● get_tokens("abcEFaG…
Let A be the set of all strings of decimal digits of length 5. For example 24157 and05189 are strings in A.(a) How many strings in A have exactly one 7?(b) How many strings in A have at least two 2’s?(c) How many strings in A have the digits in a strictly decreasing order? For example97643 and 54321 are such strings, but 14820 and 95421 are not.
write a program in C++ Fibonacci NumbersThe Fibonacci numbers are defined by the sequencef1 = 1f2 = 1fn = fn-1 + fn-2Reformulate that as5t1 = 1;t2 = 1;nextTerm = t1 + t2;After that, discard t1, which is no longer needed, and set t1 to t2 and t2 to nextTerm.Repeat fnew an appropriate number of times. Implement a program that given a numberN, prints the first N numbers in the Fibonacci sequence. For example, given the number8, the output isThe Fibonacci sequence: 1, 1, 2, 3, 5, 8, 13, 21
Given a list of n positive integers, show that there must two of these integers whose difference is divisible by n-1
Implement the first round of AES ( Advanced Encryption Standard ) in python. Given a message with 128 bits, two subkeys subkey0 and subkey1, your program should be able to perform one AddKey before Round 1 and the corresponding operations (SubBytes, ShiftRows, Mix-Columns, and AddKey) in Round 1, and output the result of the encryption after Round 1.
Implement *IN LEGV8 CODE* in DS-5 that accepts a number n, and produces the nth Fibonacci number using the efficient O(n) version. The number should be in the .data segment of your program. Your code must print the nth Fibonacci numberusing printf
For any program P that takes as input a string, can P ever solve a language other than Y(P)? If your answer is yes, give an example. If your answer is no, briefly justify your answer
Show Let f(.) be a computable, strictly monotonic function, that is, f(n+ 1) > f(n) for all n. Show B = {f(n) | n ∈ N} is recursive.
Write C++ program to show that the sum of the infinite series, which is converges to ln 2. ??= � 1(2??+ 1)(2??+ 2)????=0Compute the answer for N=50 and N=100