Which RE’s from table below have a 5’ overhang? Which ones have a 3’ Overhang?   AccI GT^CGAC BamHI G^GATCC     ClaI AT^CGAT NsiI ATGCA^T PstI CTGCA^G BglII A^GATCT TaqI T^CGA

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After restriction enzymes cut, they contain unpaired bases. Type II restriction enzymes leave ends that may be 5' overhanging, 3' overhanging, or blunt.  In all cases each end is left with a 3' OH and a 5' phosphate.  All blunt ends, and any complementary overhanging ends may be re-ligated with T4 DNA ligase, as long as at least one 5'- phosphate is present. 

 In the tables below G^AATTC means that the end after cutting with enzyme will be:

-----G      3'

-----CTTAA  5'

GTGCA^C means that the end will be:

 

-----GTGCA  3'

-----C      5'

 

 

Which RE’s from table below have a 5’ overhang? Which ones have a 3’ Overhang?

 

AccI

GT^CGAC

BamHI

G^GATCC    

ClaI

AT^CGAT

NsiI

ATGCA^T

PstI

CTGCA^G

BglII

A^GATCT

TaqI

T^CGA

 

 

 

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