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Binary Chromatography Lab Report

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Afterward, PTEN purified using affinity chromatography. Since PTEN fused with His6 tag, Ni-NTA affinity chromatography would work to purify PTEN. Ni-NTA is a type of immobilized metal affinity chromatography that contain coupled Ni2+ nickel chelate forming ligand (imiondiacetic acid) that immobilized to agarose. The science behind using Ni-NTA affinity chromatography is that histidine bind specifically and reversibly to the nickel chalet thus washing step will remove other contaminate and then His-PTEN eluted using imidazole. Bradford assay and SDS-PAGE performed to quantify and analyze the progress toward PTEN purification. The calculated concentration of the samples presented in table 8. The Concentration of samples make since having the …show more content…

since all unbounded protein removed and only bounded protein (PTEN and other protein that has affinity toward the ligand) left. Note that, some samples diluted to fall in the standard range and there are samples excluded for not being in the range. The eluted sample should include a purified PTEN and the SDS-PAGE in figure 4 confirm these expectations. The red arrow refer to PTEN and it has the same Mw 63.1 as the pervious gel, which indicated that this band is PTEN band. The eluted samples present in the SDS-PAGE shows other bands with PTEN, which represents other proteins that have affinity toward the ligand. Other purifying technique can be add to this protocol such as size exclusion chromatography to obtain more purified sample. In addition, mass spectrometry can be used to obtain the sequence and the Mw of the band (after digestion the protein from the gel) to confirm that band represent PTEN …show more content…

A scientist need to demonstrate mammalian cell transfection under very sterile technique since they grow slowly and affected by contamination resulting in lower expression. In addition, the total number of mammalian cell should maintain steady and once there is confluent, cells have no more room to grow, mammalian cell culture should split using digestive enzyme and placed into new fresh media. To do so, hemocytometer used to count mammalian cell and demonstrate the cell concentration. Table 11 shows the calculation of mammalian cell concentration and for transfecting 1000,000 cell we need 1.17 ml. Following mammalian transfection, immunoprecipitation processed for FLAG-PTEN gained from mammalian cells. Anti-FLAG antibody used as ligand just as affinity chromatography to purify FLAG-PTEN. Latter on, western blotting carried out by transferring the protein from the completed SDS-PAGE to PVDF membrane as the order in figure 5. After that, incubation with primary and secondary antibody to visualize PTEN through the chemiliuminescence reaction as shown in figure 7. The figure present FLAG-PTEN in three samples the FLAG-PTEN IP, supernatant FLAG-PTEN after IP, and lysate FLAG-PTEN before IP. Lysate FLAG-PTEN before IP and FLAG-PTEN IP spouse to contain PTEN and that confirm the success of mammalian transfection. However, the FLAG-PTEN IP showed a smeared band. That may due to high protein concentration load

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