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Essay On Yeast

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Wild-type strains including C. neoformans var. grubii H99 (serotype A) and var. neoformans JEC21 (serotype D), and C. gattii WM268 (serotype B, VGIIa) were used in this study {Perfect, 1991; Wickes, 2001; Myers}. All strains were cultured on yeast extract peptone dextrose medium (YPD) for 3 days at 30˚C. Amplification of the gib2::NAT and gib2::NEO mutant alleles. The nourseothricin and G418 resistance gene cassettes were previously inserted, respectively, inside the coding region of the GIB2 gene that encodes the atypical G/RACK1-like adaptor protein of C. neoformans {Palmer, 2007; Wang, 2014}. The mutant alleles were used as donor DNA for Cas9-mediated gene deletion in this work. Two gib2::NAT fragments was PCR amplified: one 3 kb …show more content…

The resulting gRNA was used immediately or stored at 20˚C. To generate the Cas9 ribonucleoprotein complex, 1 μl of gRNA, 8 μl of nuclease-free reaction buffer (20 mM Hepes, 150 mM KCl), and 1 μl of diluted Cas9 (1 μg/μl) were mixed. The mixture was incubated at 30˚C for 10 min to allow ribonucleoprotein complex formation (Fig. 1).

Transformation by electroporation Transformation of Cryptococcus species was performed in a Bio-Rad gene pulser Xcell electroporation system according to a previously published protocol {Lin, 2010}, 56). Briefly, fungal cells grown overnight in liquid YPD were used to start fresh cultures the next day. When cultures reach OD of 1.0, cells were precipitated and water three times with distilled water. Cells were then washed twice in electroporation buffer (EB), treated with 1 mM DDT for 30-60 min, and washed twice again with EB. Cells were resuspended in 1/10 of original volume of EB and incubated on ice until use. For electroporation, we mixed the ribonucleoprotein complexes from above and 2 μg of either gib2::NAT or gib2::NEO with 100 μl fungal cells on ice. Electroporation was performed within 5' min of mixing and with the following parameters: 450 V, 125 capacitance, and 500 ohms. Following electroporation, 1 ml of cold YPD with 0.5 M sorbitol and the contents of the cuvette were transferred to a 1.5 ml microfuge and incubated for 90 min at 150 rpm. Cells were then precipitated and plated onto YPD plates with 5-FOA,

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