Agent Step 1 Step 2 Nucleophile, Nu: Guanosine Leaving group, Y Electrophile ✗, part retained 3'-site phosphate Agent Nucleophile, Nu: Step 1 Step 2 2'01 BPA 3'-OH exon 1 Leaving group, Y 3'OH exon 1 3'0M intron 1 Electrophile X, part retained 5'-site phosphate intron I and extron 1 PO3 with nuclectide? 3'-site phosphate extron (1 and 2) POS with nucleotice?

Biochemistry
6th Edition
ISBN:9781305577206
Author:Reginald H. Garrett, Charles M. Grisham
Publisher:Reginald H. Garrett, Charles M. Grisham
Chapter28: Dna Metabolism: Replication, Recombination, And Repair
Section: Chapter Questions
Problem 22P
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Question 2:

Part a: Complete the table describing different components of intron removal from mRNA. Nu:, X and Y refer to B-type chemistry shown on the previous page. (YELLOW table shown)

Part b: Complete the table describing different components of group I self-splicing intron removal from 26S rRNA in Tetrahymena. (BLUE table shown)

Part c: Draw the intron with an all atom structure for Branchpoint A after intron removal from mRNA

Part d: Draw the Group I self-splicing intron with an all atom structure for the Guanosine cofactor after intron removal from 26S rRNA in Tetrahymena.

 

Agent
Step 1
Step 2
Nucleophile, Nu:
Guanosine
Leaving group, Y
Electrophile
✗, part retained
3'-site phosphate
Transcribed Image Text:Agent Step 1 Step 2 Nucleophile, Nu: Guanosine Leaving group, Y Electrophile ✗, part retained 3'-site phosphate
Agent
Nucleophile, Nu:
Step 1
Step 2
2'01
BPA
3'-OH exon 1
Leaving group, Y
3'OH exon 1
3'0M intron 1
Electrophile
X, part retained
5'-site phosphate
intron I and extron 1
PO3 with nuclectide?
3'-site phosphate
extron (1 and 2)
POS with nucleotice?
Transcribed Image Text:Agent Nucleophile, Nu: Step 1 Step 2 2'01 BPA 3'-OH exon 1 Leaving group, Y 3'OH exon 1 3'0M intron 1 Electrophile X, part retained 5'-site phosphate intron I and extron 1 PO3 with nuclectide? 3'-site phosphate extron (1 and 2) POS with nucleotice?
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