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The Importance Of Transversional Vocration

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When doing the sequence alignment, using BLAST, the sequences were confirmed to be those of the eight species. In other words the sequecnes were confirmed to be from Homo sapiens sapiens (modern human), Homo sapiens neanderthalensis (Neanderthal), Pan troglodytes (chimpanzee), Pan paniscus (bonobo), Gorilla gorilla (gorilla), Pongo abelii (Sumatran orangutan), Pongo pygmaeus (Bornean orangutan), and Hylobates lar (gibbon). Using BLAST, we were also able to confirm that the species were closely related since similarities were 100% or 99% for mitochondrial 16s rRNA and 100%, 99% and 96% for the mtDNA control region. After the sequences of the eight species were aligned, they were used to create a “Maximum Likelihood Estimate of …show more content…

For instance, in the mitochondrial 16s rRNA, when using the MP method, the clade containing Pan paniscus, Pongo pygmaeus, and Pongo abelii appear as a monophyletic clade 99% of bootstrap replication times (Figure 11A). However, when using the ME method, the clade contains Hylobates lar instead of Pan paniscus. Thus, the clade containing Hylobates lar, Pongo pygmaeus, and Pongo abelii appear as a monophyletic clade 98% of bootstrap replications (Figure 11A). The similarities between species was further supported by the skull measurements.

Conclusion By creating the phylogeny trees, based on the mitochondrial 16s rRNA and mtDNA control region makers, using MP and ME methods, we were able to determine the relationship between the eight primates. For instance, in the MP phylogeny based tree for mitochondrial 16s rRNA, modern humans and Neanderthal form a sister taxa that is more closely related to chimpanzee (Figure 11.3A). Moreover, MP and ME phylogeny based trees for mitochondrial 16s rRNA did support the hypothesis that modern humans and Neanderthals were the most closely related species when compared to the other six species (Figure 11.3A). However, the MP and ME phylogeny trees for mtDNA control region do not support this hypothesis since modern humans formed a sister taxa with chimpanzee while Neanderthal formed a sister taxa with bonobo (figure 11.3B). Furthermore, none of the trees support the second hypothesis

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