1 Study Guide for Lectures 8/24, 8/26, 8/31, and 9/2 Note: It is highly suggested that you reference the figures/figure legends shown in class to further help you understand class material. The Genome Project (~92% complete): • 20,000-28,000 genes in the human genome o The genome was found using a shotgun sequence. o 10% of the genome is Long Intersperse Nuclear Elements (=LINEs). This leaves the questions as to which part of the genome are LINEs? 80,000-120,000 proteins in a cell. 200,000-2,000,000 peptides in a cell. o Ex: Insulin A paper looked at 30% of the genome at 5 nucleotide resolutions and found: In terms of transcripts (mRNA) may not have a poly-A tail. 43.7% of transcripts never had a poly-A tail. 36.9% of …show more content…
There are 20 amino acids. Most of the time you use an L-enantiomer of the amino acid, however, you can have D-enantiomer forms. D-forms are often found in antimicrobial compounds and ionophores. The diverse roles of amino acids: 1. Hormones (signaling type molecules) Dopamine, thyroid type hormones 2. Metabolic Intermediates Catabolic amino acids Citrulline: key intermediate in the urea acid cycle, the pathway by which mammals excrete ammonia. Ornithine: in urea acid cycle, precursor to arginine, disposal of nitrogen. 3. Osmotic effects (Osmolytes- organic compounds affecting osmosis, soluble in solution within a cell, play a role in maintaining cell volume and fluid balance.) Ex: Antarctic fish utilize stores of amino acids to offset preservations of different ions. 4. Buffering Capacity Zwitterion (means twin in German): A zwitterion is a chemical compound that is electrically neutral but carries formal positive and negative charges on different atoms. Zwitterions are polar and usually have a high solubility in water and a poor solubility in most organic solvents. o Often times the R group is charged. Ex: Histidine (essential amino acid) the R group has a charge, pKa at pH 7.4. Modest change in pH results in change in charge; many proteins have a Histidine residue sitting in the active site. Changes ability to interact with substrate, which causes a profound change in kinetics. 6 The families of amino
When the pH is not at its optimum, the differing pH's will disrupt the bonding between the R groups of the amino acid causing its structure and the shape of the activation site to change
Preparing specimen for electron microscope hard, light microscope still very useful as a window on living cells.
3. Explain your prediction for the effect Na+ Cl- might have on glucose transport. In other words, explain why you picked the choice that you did. How well did the results compare with your prediction?
Surface Tension: The measure of how difficult it is to stretch or break the surface of a liquid.
Carbohydrates: any of a class of organic compounds that are polyhydroxy aldehydes or polyhydroxy ketones, or change to such substances on simple chemical transformations, as hydrolysis, oxidation, or reduction, and that form the supporting tissues of plants and are important food for animals and people.
1. Polar molecules A. have bonds with an unequal distribution of electric charge. B. must form ions in water solution. C. have bonds with an equal distribution of electrical charge. D. have bonds with an overall negative charge.
C. Only amino acids with polar side chains participate directly in catalysis (Cys, His, Ser, Asp, Glu and Lys). Some reactions require electron acceptors, and since no side chains are good electron acceptors coenzymes and cofactors are required for catalysis of some reactions.
5. A. Fimbriae- hair like Gram-negative bacteria that allows attachment and through that the bacteria is able to colonize.
Course description: The chemistry and biological properties of amino acids, proteins, nucleic acids, lipids, carbohydrates, and vitamins. The course includes laboratory and tutorial sessions.
(TCO 6) Which part of an individual amino acid distinguishes it from other amino acids?
The nucleus is enclosed in a nuclear membrane which has pores to allow RNA and proteins. The nucleus functions the activity in a plant cell and stores the plant’s DNA. (Plant Cell Anatomy, n.d.)
1) Leaves- Main organ for photosynthesis and transpiration. A flattened, typically green and blade-like structure of a higher plant.
1. What is Biology? Biology is the science of life. The people who study the growth, function, structure, origin, evolution and distribution of living organisms are called Biologists. There are nine main fields of Biology and each field can have many subfields within it.
The following are examples of frequently missed questions from the unit exams. The questions are similar in theme to the ones missed however were taken from blackboard and are not exactly worded like the exam questions. They are meant to act as a study guide only. Please do not have the misconception that these questions will be the exact questions on the final.
B) Proteins Proteins are made up of chains of amino acids. Each protein folds into a characteristic three dimensional shape that is essential to its function. They perform a variety of functions in cells and are probably the most diverse macromolecule in living systems. The Biuret test detects the presence of proteins and short peptides (short chains of amino acids). Biuret reagent contains a strong solution of sodium hydroxide (NaOH) and a very small amount of dilute copper sulfate solution. The reagent changes color in the presence of a protein because the amino groups in the amino acids react with the copper ions producing a violet color. A negative result is blue.