Extraction of DNA from an Onion
Molecular biologists and biochemists are involved with research in finding out as much as possible about the DNA in plants. DNA was discovered in the 1950’s, there still remains a lot to be known about it, especially how it is used to determine the physical traits that we all have, and how it regulates the workings of the body. deoxyribonucleic acid is a chemical, we can do reactions with it just like we can work with any other chemical. Experiment:
Note: You should write all observations from this lab in the observation section on the third page of this lab. These observations will account for a large part of your grade, so be neat and complete!
1) Prepare a buffer solution by pouring the
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The (hopefully) clear solution you have in this test tube consists of dissolved DNA fragments, as well as some other biochemical compounds such as RNA and some proteins. DNA is a very long molecule, but compared to the holes in a piece of filtering paper, the molecule is still small enough to pass through.
7) Obtain some ice-cold rubbing alcohol from an ice bath or a freezer. Using a drinking straw, gently add rubbing alcohol to the top until there is about an inch and a half sitting above the buffer solution. The best way to do this is to dip the drinking straw into the isopropanol bottle and then when it has filled to put your finger over the end. To add it to the test tube, slowly let it run down the side of the test tube into the DNA solution. Your goal is to have the rubbing alcohol stay on the top of the DNA solution, with as little mixing as possible.
The rubbing alcohol is used to extract the DNA from the onion juice. The reason you want the rubbing alcohol to stay on top of the onion juice is because by doing that the liquid will form two distinct layers. Generally, molecules are attracted to the boundaries of two liquids - sometimes the concentration of large molecules can be much higher at the boundary between two liquids. That’s what we’re hoping for here... if the DNA is attracted to the surface, we can pull most of it out. However, if the alcohol and onion juice mixes too much, there will be too much alcohol throughout
After it was expelled back into the cup, 1 ml of the saline rise was transferred into a micro test tube in order for it to be spun in a balanced centrifuge. The micro test tube that contained the 1 ml of saline rise was inside of the centrifuge for 2 minutes, resulting in cells at the bottom of the tube. Since all of the cells were present at the bottom of the tube, the saline was poured off and the tube was vortexed to be sure that there were no clumps of cells. Afterward, the InstaGene Master Mix (which removes cofactor to inhibit DNA cutting enzymes) was vortexed with the saline rise in order to fully mix the contents of the tube (Bio-Rad Laboratories, Chromosome 16: PV92 PCR). The tube was then incubated at 56 degrees Celsius for 10 minutes to inactivate DNAses and put on a second heat block at 100 degrees Celsius for 5 minutes to disrupt cell membranes. The tubes were put into a centrifuge then cooled down in a 4 degrees’ Celsius fridge.
In this experiment, DNA was extracted from human cheek cells using Gatorade, soap solution, and rubbing alcohol. To do this, Gatorade was swished in the subject’s mouth vigorously for 45 seconds, and then added to soap solution and rubbing alcohol. This mixture was left to sit in ice water for two to three minutes. It was hypothesized that when cheek cells were placed into Gatorade, soap solution, and rubbing alcohol, that the DNA would be extracted, forming a stringy substance. This hypothesis was supported by the results of the experiment. After adding the alcohol to the Gatorade and soap solution, a semi-translucent, fibrous substance was formed.
Scientist extract DNA for many reasons. Some scientist extract DNA for medical reasons. DNA has been used to diagnose certain diseases. It is possible to be used for genetic engineering in plants animals. It is also used as evidence in crime
There are three specific steps required to isolate DNA from its cellular contents. The steps used to remove and expose DNA from its cell are: breaking down the food type you are using by crushing it, for example a banana or strawberries, exposing the substance to a sodium chloride (NaCl) solution, subjecting the product to detergent solution (dH2O), filtering the solution and lastly, the addition of ethanol. When beginning with a solid substance, such as a banana, crushing the substance allows for
Throughout the early 19th and 20th century, many scientists have studied deoxyribonucleic acids in order to attain higher understanding over the matter. Johann G. Mendel had figured out and understood the laws of heredity. Friedrich Miescher amazingly discovered DNA in 1869, even though scientists did not understand DNA was the genetic material
In this experiment we were meant to observe the transferring of DNA. There are many ways in which DNA can be transferred into an organism, for example; transformation, transduction, and conjugation. In our experiment we used
charged DNA to bind the positively charged minicolumn. 2 ml of column wash is then used to
DNA is a term that has been used in science as well as in many parts of daily
The next day, before my lab assistants and I loaded the gel with DNA, we practiced. Each of my lab assistants took turns practicing using the micropipette. We did this to ensure that each of us knew how to suck up the perfect amount of DNA. My lab assistants and I first used fake DNA. We all took turns getting a Bio-safe DNA sample stain from our boss with our micropipette and loading it into the compartments of the gel.
Take a test tube and place it in the test-tube rack. Use a medicine dropper to add 5 drops of water to the test tube. Then add 2 drops of indicator solution to the water.
The final experiment used E.coli so all we had to do to release the dna was to add the lysing solution since there is no cell wall to break. We used Iced ethyl alcohol to form a layer above the lysate solution for the dna to float into in all of the experiments as well as tipping the vial at a 45 degree angle while we spooled the dan on our patented glass dna extraction rod.
A common technology used to identify and separate DNA, is gel electrophoresis. Gel electrophoresis is used to separate macromolecules like DNA, RNA and proteins. The DNA fragments are separated according to their size while proteins are separated by their size or their charge. Different DNA molecules are placed in the agarose gel, the gel is then placed in a gel electrophoresis chamber with a buffer solution. A gel electrophoresis chamber is composed with a positive and negative electrode which is used when the electricity shifts the DNA molecules within the gel. Each DNA molecule is negatively charged; this means that side of the gel with the wells and the molecules is set on the negative side. This will ensure that the DNA fragments and molecules pull towards the positive side. After fully ran, the movement of the DNA molecules in the gel is often observed through UV light. Gel electrophoresis is often used to separate DNA fragments in fingerprints for forensic science, paternity testing and identifying evolutionary relationships among organisms. A homemade gel electrophoresis chamber will be made and tested to compare molecules in different colors of food coloring
DNA, Deoxyribonucleic Acid, is the basic structure for all life, it is the blueprint, the instruction manual, on how to build a living organism. DNA is made up of four nitrogen bases, adenine, thymine, cytosine, and guanine which are connected by sugar-phosphate bonds. Through a process called Protein Synthesis, the nitrogen bases are the code for the creation of amino acids. Essentially, DNA makes amino acids, amino acids make proteins, proteins make organisms. This process has been taking place for much longer than scientists have been able to document. Those scientists are called geneticists and their field is genetics.
The gel is used to hold DNA together, it is made up of polysaccharide which is called agarose. The molecules of a gel are held together by hydrogen bonding and form tiny pores. DNA samples are placed in the wells; which is a tiny pocket in the gel(Gel Electrophoresis). Electric current is passed through the gel so one end of the gel is positive charge and another end is a negative charge. In this case, oppositely charged particles attract so negatively charged molecule is attracted towards a positive charge. The gel consists of a permeable matrix through which molecules pass through. Small size molecules move faster through the gel than
Since Mendel’s time, our understanding of DNA, genes, and chromosomes has grown immensely, and much of this understanding and discoveries were influenced by Mendel’s research on pea plants.