Examine the DNA sequence shown below. You have been tasked with designing Primers for PCR amplification of the whole fragment shown. Your colleague said that she would design one primer and came up with this sequence – 5’ TTGCATCG 3’. You, being a good scientist, need to confirm that her work is good. Where will this primer bind on the target DNA, and will this primer work as part of a pair to successfully amplify this fragment of DNA? 5’ CGATGCAATCGAGCTATGGCATATCATAAGCGATAGACAGATAGCA 3’ GCTACGTTAGCTCGATACCGTATAGTATTCGCTATCTGTCTATCGT              a. It will bind to the bottom strand on the left side of the fragment, and is suitable to amplify the fragment by PCR. b. It will bind to the top strand on the left side of the fragment, but it is unsuitable to amplify the fragment by PCR. c. It will bind to the top strand on the right side of the fragment, but it is unsuitable to amplify the fragment by PCR. d. It will bind to the bottom strand on the right side of the fragment, and is unsuitable to amplify the fragment by PCR.

Human Anatomy & Physiology (11th Edition)
11th Edition
ISBN:9780134580999
Author:Elaine N. Marieb, Katja N. Hoehn
Publisher:Elaine N. Marieb, Katja N. Hoehn
Chapter1: The Human Body: An Orientation
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Examine the DNA sequence shown below. You have been tasked with designing Primers for PCR amplification of the whole fragment shown. Your colleague said that she would design one primer and came up with this sequence – 5’ TTGCATCG 3’. You, being a good scientist, need to confirm that her work is good. Where will this primer bind on the target DNA, and will this primer work as part of a pair to successfully amplify this fragment of DNA?

5’ CGATGCAATCGAGCTATGGCATATCATAAGCGATAGACAGATAGCA

3’ GCTACGTTAGCTCGATACCGTATAGTATTCGCTATCTGTCTATCGT             

a.

It will bind to the bottom strand on the left side of the fragment, and is suitable to amplify the fragment by PCR.

b.

It will bind to the top strand on the left side of the fragment, but it is unsuitable to amplify the fragment by PCR.

c.

It will bind to the top strand on the right side of the fragment, but it is unsuitable to amplify the fragment by PCR.

d.

It will bind to the bottom strand on the right side of the fragment, and is unsuitable to amplify the fragment by PCR.

e.

It will bind to the top strand on the left side of the fragment, and it is suitable to amplify the fragment by PCR.

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