Consider 28 NADH and 21 FADH2 molecules funneling electrons into the electron transport chain coupled to oxidative phosphorylation: 1. The total number of protons (H*) pumped during the oxidation of 28 NADH molecules is 2. The total number of protons (H*) pumped during the oxidation of 21 FADH2 molecules is 3. The number of ATP molecules produced from the oxidation of 28 NADH molecules is
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- The Relative Efficiency of ATP Synthesis in Noncyclic versus Cyclic Photophosphorylation If noncyclic photosynthetic electron transport leads to the translocation of 7 H+/2e- and cyclic photosynthetic electron transport leads to the translocation of 2 H+/e-, what is the relative photosynthetic efficiency of ATP synthesis (expressed as the number of photons absorbed per ATP synthesized) for noncyclic versus cyclic photophosphorylation? (Assume that the CF1CF0-ATP synthase yields 3 ATP/14 H+.)Figure 27.3 illustrates the response of R (ATP-regenerating) and U (ATP-utilizing) enzymes to energy charge. a. Would hexokinase be an R enzyme or a U enzyme? Would glutamine: PRPP amidotransferase, the second enzyme in purine biosynthesis, be an R enzyme or a U enzyme? b. If energy charge = 0.5: Is the activity of hexokinase high or low? Is ribose-5-P pyrophosphokinase activity high or low? c. If energy charge = 0.95: Is the activity of hexokinase high or low? Is ribose-5-P pyrophosphokinase activity high or low?A new ATP-producing protein is discovered that couples ATP production to the oxidation of NADPH by oxidative phosphorylation. Assume that the value of ΔGo for ATP synthesis is 30 kJ•mol−1. If this protein only produces 1 molecule of ATP per reaction that consumes one NADPH: a. How much free energy is wasted, under standard conditions?b. How many more ATP molecules could be created by a perfectly efficient electron transport chain from one NADPH?
- Under standard conditions, NADH reoxidation by the electron-transport chain has a free-energy change equal to –220 kJ/mol. With 100% efficiency, how many ATP could be synthesized under standard conditions? What is the "actual" efficiency given these numbers?What is the P:O ratio for electrons entering the electron-transport chain that originate from reoxidation of acyl-CoA dehydrogenase? A. greater than the P:O ratio for NADH reoxidation B. approximately the same as the P:O ratio for NADH reoxidation C. less than the P:O ratio for NADH reoxidation but more than the P:O ratio for Complex II reoxidation D. approximately the same as the P:O ratio for Complex II reoxidation E. less than the P:O ratio for Complex II reoxidationa) Calculate the enzyme and specific activity of a reaction with 3 μM Hsp90 using the following information: The rate is measured in a spectrophotometer as 0.028 OD units/min in a 1 ml reaction volume. The absorbance was detected at 340nm and the extinction coefficient for NADH at this wavelength is 6200 L M-1 min-1 and the molecular mass of Hsp90 is 82.7 kDa. The rate of NADH utilisation is equivalent to the rate of ATP utilised by Hsp90. Show all your calculations and the units for your answers. b) Calculate the turnover number for the reaction described in (a) above
- Consider the malate dehydrogenase reaction, part of tricarboxylic acid cycle, shown below. malate + NAD+ oxaloacetate + NADH + H+ ΔGo ’ = 29.7 kJ/mol. It has been reported that the concentrations of NAD+ and NADH in yeast mitochondria were 20 mM and 0.3 mM, respectively. If we performed similar measurements and also determined that the concentration of malate in yeast mitochondria was 0.5 mM and that of oxaloacetate was 0.1 µM at pH 7.0 at 37˚C, use this information to calculate the free energy of the reaction of yeast in mitochondria.Consider the malate dehydrogenase reaction, part of tricarboxylic acid cycle, shown below. malate + NAD+ oxaloacetate + NADH + H+ ΔGo ’ = 29.7 kJ/mol. It has been reported that the concentrations of NAD+ and NADH in yeast mitochondria were 20 mM and 0.3 mM, respectively. If we performed similar measurements and also determined that the concentration of malate in yeast mitochondria was 0.5 mM and that of oxaloacetate was 0.1 µM at pH 7.0 at 37˚C, use this information to calculate the equilibrium constant for the given reaction.Given that malonate inhibits succinate dehydrogenase which of the following statements is TRUE? a. FADH2 results in only 4 H+ being pumped out of the mitochondrial matrix. b. All electron transport is inhibited. c. Transfer of electrons from NADH to Coenzyme Q (ubiquinone) is inhibited. d. Transfer of electrons from FADH2 to Coenzyme Q (ubiquinone) is inhibited. e. NADH results in only 4 H+ being pumped out of the mitochondrial matrix. Clear my choice
- For the Complex III in the electron transport chain: Complex III step 1: UQH2 is oxidized in a 2 electron process. Cytochrome c is reduced and UQ is reduced to UQH in two 1 electron processes. Complex III step 2: UQH2 is oxidized in a 2 electron process. Cytochrome c is reduced and UQH is reduced to UQH2 in two 1 electron processes. The necessary standard reduction potentials are: UQ + 2H+ + 2e- UQH2 E° = 0.06 V cyt c (Fe3+) + e- cyt c (Fe2+) E° = 0.254 V UQ + H+ + e- UQH. E° = 0.03 V UQH. + H+ + e- UQH2 E° = 0.19 V Calculate the total redox potential of the complex. Now calculate how many moles of protons can be translocated across the inner mitochondrial membrane if translocation of 1 mole requires 23 kJ. Calculate the free energy available for proton translocation assuming a 2electron process for each complex.Discuss why the electron transport chain ceases to operate when actively respiring mitochondria are exposed to an inhibitor of ATP Synthase. Name several specific inhibitors of ATP synthase. How do those inhibitors inhibit ATP synthase? What is the thermodynamic result of this inhibition? Why does the inhibition of the synthase cause inhibition of the ETS?A group of researchers are interested in producing hydrogen gas from microbial cells. They want to know the maximum theoretical yield of H2 per molecule of glucose. Assuming that a glucose molecule fed to a cell is directly converted to glucose-6-phosphate(G6P) and undergoes the pentose phosphate pathway. Calculate how many molecules of NADPH can be obtained from this pathway along Co2 and H+.