H3N. Amino acids are bonded together in a linear polymer to form peptides or proteins. A small peptide is shown below. Define the two ends of this peptide. A) I is the N terminus; II is the C terminus B) I is the C terminus; II is the N terminus C) I is the 5' terminus; II is the 3' terminus D) I is the 3' terminus; II is the 5' terminus
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- Which of the following is an example of protein denaturation? * A. Amino acids fold into repeating patterns due to hydrogen bonding of the peptide backbone. B. Several amino acids are joined together together via peptide bonds. C. A protein binds with with a substrate, lowering the activation energy of reaction. D. A protein is exposed to extremely high heat, causing it to lose its secondary structure and be left with only its primary structure. E. Results to unfolding, partial or incomplete disorganization of the protein's secondary and tertiary structure.How do you differentiate the amino acid peptides given below?? Peptide 1: E-R-G Peptide 2: P-K-A-E-S Peptide 3: A-N Peptide 4: W-I-R-E-D Peptide 5: C-T-E-R-For the three peptides below, label whether they would form an amphiphilic beta-strand, amphiphilic helix, or nothing. Explain why. Part a) S-V-K-I-Q-M-R-A-D-L Part b) A-L-E-H-M-F-R-Y-L-A-K Part c) A-L-A-I-W-F-P-D-R-K-E
- Which of the following peptides will likely form an irregular structure? A-D-I-E-L-Y-F-H-I-C-V-D-E A-R-E-G-H-Y-D-G-C-Q-S-G A-R-E-V-H-Y-D-I-C-Q-S-F A-R-E-F-C-Y-D-I-C-Q-S-PThere is parts A-D for the picture provided. A) A peptide has the sequence, Arg-Cys-His-Tyr-Glu-Asn-Lys-Asp. What is the net charge at pH 1? Choices: -5 -4 -3 -2 -1 0 +1 +2 +3 +4 +5 B) A peptide has the sequence Arg-Cys-His-Tyr-Glu-Asn-Lys-Asp. What is the net charge at pH 5? Choices: -5 -4 -3 -2 -1 0 +1 +2 +3 +4 +5 C) Same Peptide sequence, What is the net charge at pH8.5, (N-terminus is pronated) Choices: -5 -4 -3 -2 -1 0 +1 +2 +3 +4 +5 D) A peptide has the sequence, Arg-Cys-His-Tyr-Glu-Asn-Lys-Asp. What is the net charge at pH 13? Choices: -5 -4 -3 -2 -1 0 +1 +2 +3 +4 +5 Thank You!Although all of these may play a part, the major driving force in protein folding is: a) hydrogen bond formation b) salt bridge formation c) steric interactions d) the hydrophobic effect A partially folded protein is called a a) peptide template b) active domain c) molten globule d) precursor protein Which of these processed is NOT seen in protein denaturation? A) subunits are dissociated b) folding is unraveled c) alpha helix and beta sheets are unraveled d) peptide bonds are broken. A protein which has more than one stable conformation is called a: a) chaperone protein b) molten globule c) flexible protein d) inherently unstructured protein If a denatured protein does not spontaneously renature upon removal of denaturing agents, it may require a ____ to renature. a) chaperone protein b) molten globule c) flexible protein d) inherently unstructured protein Prion protein and amyloid protein have which trait in common? A) They denature very easily…
- Which of the following peptides will likely adopt an alpha helix structure? (idk) A-D-I-E-L-Y-F-H-I-C-V-D A-R-E-P-H-Y-D-P-C-Q-S A-D-I-E-L-Y-M-H-I-C-V-D A-R-E-V-H-Y-I-D-C-Q-F__________ are composed of a single linear (unbranching) chain of covalently bound amino acids. Select one or more: a. peptides b. triglycerides c. codons d. nucleotides e. glycosides.Draw all the Amino Acids- All 19 – Draw out the Peptide backbone atoms and draw out the side chains for the amino acid at pH 1, 7 and 13. alanine - ala - A arginine - arg - R asparagine - asn - N aspartic acid - asp - D cysteine - cys - C glutamine - gln - Q glutamic acid - glu - E glycine - gly - G histidine - his - H isoleucine - ile - I leucine - leu - L lysine - lys - K methionine - met - M phenylalanine - phe - F proline - pro - P serine - ser - S threonine - thr - T tryptophan - trp - W tyrosine - tyr - Y valine - val - V
- A peptide with the sequence isoleucine1-aspartate2-valine3-lysine4-proline5-glutamate6 is located at the surface of a protein. Which residues are likely oriented toward the interior of the protein and what is the most likely secondary structure that this peptide is in? a.) Residue numbers 2, 4, 6; alpha helix b.) Residue numbers 1, 3, 5; alpha helix c.) Residue numbers 1, 3, 5; beta sheet d.) Residue numbers 2, 4, 6; beta sheetRefer to the figure below. Replacing lysine with another amino acid in the protein may alter the shape and function of the protein. Replacing lysine with which type(s) of amino acid(s) would lead to the least amount of change in the tertiary structure of this protein? Explain.Part a) Draw the peptide C-H-A-R-G-E-D. What is its total charge at pH 7. Part b) Draw the peptide A-C-I-D-I-F-I-E-R. What is its total charge at pH 7.