Good explanationAsapThanks Look at the schematic illustration of a protein (3D conformation) belpw. If the highlighted SER amino acid were to be mutated to a PHE, which of the following options would be the most likelyoutcome?ofO Loss of functionality to interact with other molecules via lonic bonding at this site.O Loss of 3D structure as the highlighted amino acid is important for hydrophobic interactions buried in the protein.O Loss of functionality to interact with other molecules via disulfide bonding at this site.O Loss of post translational modification involving N-linked glycosylation at this site.Loss of post translational modification involving, phosphorylation at this site.SER

Proteins are the biomolecules that are made up of Aminoacids joined by Peptide bond. Proteins exist…

Answered: Look at the schematic illustration of a…

Biochemistry

9th Edition

ISBN:9781319114671

Author:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.

Publisher:Lubert Stryer, Jeremy M. Berg, John L. Tymoczko, Gregory J. Gatto Jr.

Chapter1: Biochemistry: An Evolving Science

Section: Chapter Questions

Problem 1P

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Similar questions

In the tertiary structure of a protein, which pair of amino acid side chains would be most likely to participate in hydrophobic interactions? Asn/lys ser/cys gln/tyr val/thr phe/lêu
The three-dimensional conformation of a protein may be strongly influenced by amino acid residues that are very far apart in sequence. This relationship is in contrast to secondary structure, where the amino acid residues are: a. always side by side. b. generally near each other in sequence. c. invariably restricted to about 7 of the 20 standard amino acids. d. often on different polypeptide strands. e. usually near the polypeptide chain's amino terminus or carboxyl terminus.
Amino acids project from each polypeptide backbone in a β-sheet in an alternating fashion (oneabove the plane and the next below the plane – see Fig 3.8B). Consider the following proteinsequence: Leu-Lys-Val-Asp-Ile-Ser-Leu-Arg-Leu-Lys-Ile-Arg-Phe-Glu.a. Is there a pattern to these amino acids? If so, what is it? b. What does this sequence of amino acids mean for the hydrophobicity/hydrophilicity of theresulting β-sheet? c. Can you make a prediction about how the β-sheet will be arranged in higher levels of protein structure? If so, what prediction would you make?
When an amino acid's side chain, such as aspartic acid, has a pKa, that pKa is not the same if the amino acid occurs on the interior of a protein. Why would the pKa of a side chain of an Asp occuring on the inside of a protein be different from an Asp on the outside of a protein?
Which of the following statements are correct about the molten globular state of protein folding (select all that appy)? A. May be short-lived or long-lived intermediate in protein folding B. Contains substantial levels of secondary structure C. Has loose packing of hydrophobic core D. Larger radius of gyration than dentaured state E. Is a more compact state than the native confomation
Which of the following statements are correct about protein structure (select all that apply)? A. Post-translational modifications such as glycosylation or phosphorylation may alter the structure of a protein B. Only amino acids with a net charge may interact with other amino acids C. The 3D structure of a protein is determined primarily by the protein backbone/main chain conformation while the amino acid sidechains play only a minor role. D. Hydrophobic interactions play a key role in protein folding E. Amino acid sidechains contribute to 3D structure through their ability to form hydrogen bonds with other amino acids
Although all of these may play a part, the major driving force in protein folding is: a) hydrogen bond formation b) salt bridge formation c) steric interactions d) the hydrophobic effect A partially folded protein is called a a) peptide template b) active domain c) molten globule d) precursor protein Which of these processed is NOT seen in protein denaturation? A) subunits are dissociated b) folding is unraveled c) alpha helix and beta sheets are unraveled d) peptide bonds are broken. A protein which has more than one stable conformation is called a: a) chaperone protein b) molten globule c) flexible protein d) inherently unstructured protein If a denatured protein does not spontaneously renature upon removal of denaturing agents, it may require a ____ to renature. a) chaperone protein b) molten globule c) flexible protein d) inherently unstructured protein Prion protein and amyloid protein have which trait in common? A) They denature very easily…
It is observed that as temperature is increased, most protein molecules gofrom their defined, folded state into a random-coil, denatured state thatexposes more hydrophobic surface area than is exposed in the folded state.(a) Given what you have learned so far about ΔH and ΔS, explain why thisis reasonable. (b) Sometimes, however, proteins denature as temperature is decreased.How might this be explained?
Refer to the figure below. Replacing lysine with another amino acid in the protein may alter the shape and function of the protein. Replacing lysine with which type(s) of amino acid(s) would lead to the least amount of change in the tertiary structure of this protein? Explain.
Which of the following, if any, is correct about protein folding? a)2° structure formation is primarily entropic, 3° structure formation is primarily entropic b)2° structure formation is primarily entropic, 3° structure formation is primarily enthalpic c)2° structure formation is primarily enthalpic, 3° structure formation is primarily entropic d)2° structure formation is primarily enthalpic, 3° structure formation is primarily enthalpic e)None of the above
Of the following amino acids, which 3 are most likely to be found on surface of a single protein. a) Arg b) Trp c) Cys d) Phe e) Leu f) Lys
Refer to the figure below. Replacing lysine with another amino acid in the protein may alter the shape and function of the protein. Replacing lysine with which type(s) of amino acid(s) would lead to the least amount of change in the tertiary structure of this protein? Explain your answer.

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