Peptide 1: VALKTQAM Peptide 2: LDGKM Peptide 3: TQAM Peptide 4: LDGK Peptide 5: MVALK The sequence of the original peptide is:
Q: A small peptide has two pKa values of 3.42 and 8.74. What is the isoelectric point for this peptide?…
A: Isoelectric point: The isoelectric point(pI) is the pH at which a particular molecule carries no…
Q: Draw the ff. peptides: DK YES CHEM What is the pI of each peptide? Predict the ionic form of the…
A: Peptides are small polymer of amino acids which is linked by peptide/amide (covalent bond). Alpha…
Q: Decide whether you will use peptide YAD or peptide SHY Draw the peptide at pH 7.
A: Given peptide 1) YAD 2) SHY Y = Tyrosine A = Alanine D = Aspartic Acid S =…
Q: Peptide bond structure is planar and has considerable double bond character permitting rotation…
A: The bond that connects the aminoacids is called Peptide bond. It is formed by dehydration Synthesis…
Q: sample a peptide of known sequence was treated with trypsin; another sample of the same peptide was…
A: Protein sequence analyses are experimental methods that determine the amino acid sequence of a…
Q: Which peptide sequence is most likely to be found within the inner core of a globular protein?…
A: Biochemistry is a branch of science that deals with the study of chemical processes related to the…
Q: Following the IUPAC rules for naming small peptides, assign a name for Leu–Lys–Trp–Met
A: Peptides are short chains of between two and fifty amino acids, linked by peptide bonds. Chains of…
Q: the peptide (written N-terminal to C-terminal) represented by Ala-Ser-Ala-Tyr the same as the…
A: Ans. Yes, the polypeptide chain of amino acid will be Similarly in structure and function whether it…
Q: Please draw the given peptide and calculate the net charge at pH 1, 4, 8 and 12. GRNVGHEWA
A: Peptides are short chains of a range of two to fifty amino acids, connected by peptide bonds. Chains…
Q: At pH-4, what is the net charge of the peptide GKPAD? O+0.5 O-1.0 Oo -0.5
A: The sequence of the given peptide is as follows: Gly-Lys-Pro-Ala-Asp The amino acids are composed of…
Q: Peptide #1: L-I-T-V Peptide #2: C-Q-H-R Peptide #3: E-G-E-A Which peptide is the most basic?…
A: Amino acids are the building blocks of protein. An amino acid contains a carboxylic acid and a-amino…
Q: The tripeptide +H3N-Leu-His-Glu-COO- has pKa values of 2.2, 3.6, 6.0 and 9.1. The isoelectric…
A: Isoelectric point (pI) is the pH at which there is no net charge on the molecule. For a amino acid,…
Q: Peptides can be separated according to their charges via an ion-exchange column. In a…
A: Ion exchange chromatography is used to separate molecules based on the charge. Anion and cation…
Q: A sample of an unknown peptide was divided into two aliquots. One aliquot was treated with trypsin,…
A: Proteolytic cleavage is basically the process of breaking the peptide bonds between amino acids in…
Q: NH, SH NH, он HN C. H,N HN PEPTIDE RNGCSN NH, PEPTIDE AHIKP
A: Trypsin is a serine protease that is found in the digestive system of vertebrates where it…
Q: Digestion of a peptide with trypsin generates two smaller peptide products: methionine-glycine and…
A: pepsin is a serine protease that cleaves the bond present in the C-terminal of amino acids Lysine…
Q: A sample of a peptide of unknown sequencewas treated with trypsin; another sample of the same…
A: Introduction: The chain of amino acids is known as a peptide which is connected by an amine or…
Q: A pentapeptide was found to increase the rate of hydrolysis of fats in the adipose tissues to…
A: *Electrophoresis is a technique used to separate genetic materials like DNA and RNA and protein…
Q: Trypsin digestion of the peptide sequence M3-E4-R5-P6-F7-Hg-Ag-10-A11-R12-T13-Y14- G15-P16 results…
A:
Q: A peptide with 19 amino acid residues was digested with trypsin and generated the following…
A: The one letter code for different amino acids are :- G - glycine I - isoleucine R - arginine S -…
Q: For the peptide: TREATS, what would be the y3 ion? EATS TRE TS ATS
A: We are authorized to answer one question at a time since you have not mentioned which question you…
Q: A sample of a peptide of unknown sequence was treated with trypsin; another sample of the same…
A: Trypsin is basically a serine protease where it hydrolyses proteins. It is synthesized in the…
Q: I. True or False a. The beta-pleated sheets are formed by H-bonds among adjacent regions of the…
A: Proteins are big, complex molecules that have a number of important tasks in the human body. They…
Q: 3. Three dipeptides were separated by paper electrophoresis at pH 6.4 and the results are shown…
A: Natural proteins or peptides are composed of twenty standard amino acids attached together via…
Q: What side group reacts with this reducing agent? What does the fact that these peptides both react…
A: There are four levels of protein structure hierarchy: Primary structure, Secondary structure,…
Q: how is peptide molecules similar to biuret molecules
A: Introduction: Peptides are short polymers of amino acids that are connected by peptide bonds. It is…
Q: Using mass spec, the primary structure of 4 peptides is obtained from a tissue sample: VMDEL, GHKRT,…
A: Amino acid is the basic unit of a protein. An amino acid contains carboxylic acid groups (—COOH),…
Q: Which of the peptide sequences below best matches the hydropathy plot shown? 5 10 15 Residue Number…
A: Hydropathy plot is a quantitative analysis of the distribution of amino acids in a protein.…
Q: Reaction of the α-carboxyl group of an amino acid or peptide with phenylisothiocyanate allows for…
A: Above statement is about Edman degradation. It ia a method of DNA sequencing.
Q: This diagram shows the allowed rotations about the backbone of a peptide: Sigmoidal Curve Homology…
A: The amide group (CO-NH) is referred as peptide peptide group and has a rigid planer structure. The…
Q: Use the one letter code to give the sequence of this peptide
A: A polypeptide is a chain structure, which is comprised of several amino acids. All these amino acids…
Q: The sequence of crinia-angiotensin, an angiotensin II-like undecapeptide from the skin of the…
A: Undecapeptide represents a peptide that is composed of a chain of 11 amino acid residues. Edman…
Q: Which peptide in below pair has side chains that exhibit predominantly van der Waals forces?…
A: Proteins/peptides fold with the help of van der Waals forces. The significant types of van der waal…
Q: A polypeptide is subjected to the following digestion procedures and the fragments are sequenced.…
A: For this question we just need to to know sites of Trypsin and Cynogen Bromide at which they act and…
Q: For the peptide: TREATS, what would be the y3 ion? EATS TRE O TS ATS
A: The B and Y ions for any given peptide represent the two halves formed by splitting the original…
Q: Enter an estimate for the charge on the peptide KPIVRFDEESC at pH 8.0.
A: The polypeptide is considered as the long chain of amino acid, which are joined by the peptide bond.…
Q: polypeptide is made up of ten isoleucines, then ten tyrosine, and lastly one glutamic acid. What…
A: A protein or a polypeptide is made up of Amino acids linked together by peptide bonds. Each and…
Q: A peptide contains equimolar amounts of lysine, phenylalanine, tyrosine, and glycine. Treatment with…
A: Amino acids are monomers of protein. These amino acids are bound together by a peptide bond to form…
Q: Carefully analyze the structures of the peptides 1-4 and determine which of the peptide(s) will be…
A: Amino acids are the molecules that join to form a protein structure. The bond formed between two…
Q: Which of the peptide sequences below best matches the hydropathy plot shown? 5 10 Residue Number 2…
A: Hydrophobicity is defined as the tendency of non-polar molecules to form aggregates to reduce their…
Q: A sample of an unknown peptide was divided into two aliquots. One aliquot was treated with trypsin;…
A: Introduction Peptides Are Short Sequences of Amino Acid Monomers Joined by Amide Bonds That Occur…
Q: Which one of the following peptides is more likely to aggregate in water solution ? TSCKSSTCCSSKTT…
A: Answer- option B. GMPILAALGGGPML Isoleucine and phenylalanine amino acid is prese t i this which…
Q: A sample of an unknown peptide was divided into two aliquots. One aliquot was treated with trypsin…
A: Trypsin cleave the peptide on the carboxy side of arginine and lysine residues. Cyanogen bromide…
Q: In standard nomenclature, peptide sequences are read out in which direction? a) C to N b) 3’ to 5’…
A: A peptide is a compound consisting of two or more amino acids linked in a chain in which the…
Q: In this peptide the amino terminus is the amino Cys-Ala-Gly-Arg-Gln-Met acid a.arg b.Cys
A: "Since you have asked multiple question, we will solve the first question for you. If you want any…
Q: A NONAPEPTIDE that attacks and kills cancer cells has just been recently isolated from a rare…
A: The peptides are formed by linking amino acids through peptide bonds between the carboxyl and the…
Q: is the N-terminal amino acid of the peptide produced is the C-terminal amino acid of the peptide…
A: The central dogma of molecular biology is the study of synthesis of a polypeptide chain from the…
Q: Refer to image below: What type of peptide is it? " Choose dipeptide tripeptide polypeptide
A: Hi! Thanks for your question. As you have posted multiple questions and have not mentioned which one…
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- 1. Which peptide would be more soluble at pH 7.0, (Val)₂₀ or (Asp)₂₀ ? at pH 3.0, (Gly-Glu-Val)"Regarding resolution of mass spectrometers and various ways mass of peptides can be represented, which is or are true? " "A larger peptides will have a smaller difference between the monoisotopic and average masses, compared to smaller peptides, because the contribution of 13C is greater. " Higher resolution allows investigators to distinguish between monoisotopic masses and other masses of otherwise identical peptides. "Average mass size is always smaller than monoisotopic mass, because 13C and 15N contribute to monoisotopic mass. " "Monoisotopic mass is calculated as if there are no heavy isotopes within the peptide, and so is always smaller than the average observed mass."1CFD CALCIUM-FREE CALMODULIN How long is the protein’s primary sequence?Does this protein have any secondary, tertiary and/or quaternary structures present?Are there any molecular additions to this protein that are not amino ac
- 6. Which of the following statements concerning the BLOSUM62 substitution matrix is correct?a. Ala is aligned with Arg more often than expected by chance.b.Ala is never substituted by Cys.c. Tryptophan is substituted less frequently than any other amino acid.DO NOT COPY OLDER ANSWERS! AND SHOW FULL WORK! I have a mixture of 4 proteins, whose sequences are shown below (note that each protein is a 100-repeat of the sequence shown). Protein A: (Gly-Ala-Lys-Val-Ile-Phe-Glu-Val-Asn-Gly) Protein B: (Ala-Ala-Lys-Arg-Ile-His-Glu-Ala-Asn-Lys) Protein C: (Glu-Val-His-Asp-Ala-Asp-Glu-Val-Asn-Asp) Protein D: (Ala-Lys-Arg-Phe-Trp-Phe-Gly-Ile-Ala-Gly) 1) Which protein/s are MOST LIKELY to precipitate out at a pH of 3.5? a) A b) B c) C d) D e) B & C f) A & D g) None of them h) Cannot be determined.Chymotrypsin digestion, separation of peptides, and Edmann technique give the sequences for peptide fragments as follows: C-1 G-A-E-A-T-E C-2 G-K-V-G-A-H-A-G-E-Y C-3 V-L-S-P-A-K-T-N-V-K-A-A-W What is the sequence for the peptide? NOTE: Label the fragments when reconstructing the peptide chain e.g. for trypsin T-1, T-2 etc...
- 1. A mixture of proteins with the following properties were purified using cation exchange chromatography. Which of the following peaks correspond to the correct protein?Protein M- pI- 11, size- 60 KdaProtein N- pI- 8, size- 112 KdaProtein O- pI- 6, size- 280 KdaProtein P- pI- 4, size- 36 Kda[N.B: I was trying to upload pictures, but it was interrupting, Peak C is the highest peak, Peak D is lowest, Peak B is higher than D; however lower than C and A, Peak A is lower than C only, higher than B and D] a) Peak A is P b) Peak C in N c) Peak D is P d) Peak B is O e) Peak A is M 2. Which transition state analog is the most effective competitor for serine protease such as Chymotrypsin?a) R-C=O-NH-R’b) R-C=O(CH3)-NH-R’c) R-CH(OH)-CH(NH2)-R’d) R-CH(OH)-NH-R’e) R-CH=NR’ 3. If a 14C fatty acid labelled with C14 is fed to a cow, after 30 minutes of Beta oxidation, where will the C14 be found?a) Acetyl coA b) Propionyl coA c) Glutamine d) Glucose 4. How many carbons will…What is the difference between a peptide and a protein? 2. What type of bond is the peptide bond? Explain why the peptide bond is rigid. 3. The pentapeptide Gln-Tyr-Asn-Ala-Asp is present in human cerebrospinal fluid, and its concentration increases in demyelinating diseases. In these diseases, the myelin sheath of nerves is damaged and impairs the conduction of nerve signals. a. What is the N-terminal amino acid? b. What is the C-terminal amino acid? c. How many peptide bonds does this pentapeptide contain? From how many amino acids is this pentapeptide derived? d. Write the structure, the three-letter designation and the IUPAC name of this pentapeptide.1a) In MALDI-TOF data, when performing peptide mass mapping search, the number of peptides and the sequence coverage decreases, but protien score increase. Explain b) As the same as part a, the peptide masses and the coverage remain the same, but the protien score increase, explain how this can happen.
- 5. Would ninhydrin test be useful and reliable for showing the presence or absence of proteins? Explain. 6. From the data in table C, which protein can bind with heavy metals and may find use against heavy metal poisoning?1. Analysis of a peptide antibiotic purified from a strain of Bacillus brevii resulted in the following significant information: - Complete hydrolysis of the peptide yielded equimolar amounts of Leu, Orn, Phe, Pro, and Val - Molecular weight of the peptide was estimated to be aroung 1,200 Da - The peptide failed to undergo hydrolysis when treated with carboxypeptidase - Partial hydrolysis and then chromatographic separation of products yielded the following di- and tripeptides: Leu-Phe, Phe-Pro, Orn-Leu, Val-Orn, Val-Orn-Leu, Phe-Pro-Val, Pro-Val- - Orn Treament with dinitrofluorobenzene (DNFB) followed by complete hydrolysis yielded only free amino acids and the DNFB-derivatized ornithine at its side chain By using the above information, deduce the amino acid sequence of this peptide antibiotic. Write the final peptide sequence using 3-letter abbreviations. Show the complete and step by step solution.1) what is the net charge of the amino acid leucine of it is on the C-terminus end and why? 2) if the amino acid was changed to lysine on the c-terminus end explain why and what the net charge would be?.