Z101--Mechanisms of Evolution & Modes of Selection Packet
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101
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Biology
Date
Dec 6, 2023
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PRACTICE QUESTIONS: Mechanisms of Evolution & Modes of Selection
Spring 2023
©Juanita Diaz 2023
Determine whether each of the following scenarios is a result of mutation, genetic drift, or gene flow. If the
scenario
is a result of genetic drift, identify whether it is a result of the founder’s effect or the bottleneck effect.
A large deletion in chromosome 16 of soybean plants results in seeds with a higher sucrose content than
seeds from soybean plants without the deletion.
There are some
Trachelipus rathkei
(a terrestrial isopod) populations that live
in normal habitats and some that live in habitats that are polluted by heavy
metals. The populations that live on the polluted habitats have adaptations
that allow them to safely process levels of heavy metals that would be toxic to
T. rathkei
from normal habitats. Some
T. rathkei
from normal habitats
disperse to polluted habitats, mate with individuals from the polluted habits,
and have offspring that are not as good at processing heavy metals.
After a hurricane, a small group of green iguanas floated across the ocean on a raft of logs and uprooted
trees to an island that did not have any iguanas. This small group established a new population on the
island.
Over the past 10,000 years, European wolf populations have experienced severe population decline due
to habitat fragmentation and overhunting, such that the current European wolf populations are much
smaller than their prehistoric populations. Although current wolf populations are starting to grow, they
have very low genetic variation.
Eurytemora affinis
(a species of copepod) individuals can be transported in ship
ballast water between populations in the North and Baltic Seas. Individuals from
a freshwater population are transported to a high salinity population, breed with
individuals from the high salinity population, and introduce alleles for freshwater
tolerance into the population.
Certain variants of the Fibrillin 1 gene (
FBN1
) are associated with differences in height in Peruvian
individuals. The difference in height is caused by a change in one base-pair of the
FBN1
gene that
results in a different amino acid being added to the protein, and is associated with shorter height in the
individuals who have it.
Picture credit: Carol Lee
Picture credit: Katja Schulz
PRACTICE QUESTIONS: Mechanisms of Evolution & Modes of Selection
Spring 2023
©Juanita Diaz 2023
Each of the following scenarios are an example of natural selection. Determine whether each of the
scenarios is a result of diversifying (disruptive) selection, directional selection, or stabilizing selection.
Albino deer (deer with white fur) are easy for predators to see and experience high mortality compared
to deer with brown fur.
The asp viper can be one of several color morphs. The melanistic morph (dark, solid color) snakes are
found in mountainous regions, where the dark color provides increased thermoregulation. The blotched
morph (blotches of light and dark color) snakes are found in wooded areas at lower elevations, where
their coloration provides camouflage in their forest environment. Morphs that are intermediate between
the melanistic and blotched morphs are not common.
Large hawkmoths (
Agrius convolvuli
) eat nectar found at the
end of flower-tubes of the South Africa iris, which are very
long. Large hawkmoths have very long tongues to reach the
nectar. Large hawkmoths with tongues that are too short are
unable to reach the nectar, which means they are unable to eat.
Antelopes are unable to outrun/outmaneuver predators if their legs are too short, but are prone to
breaking bones if their legs are too long.
One gene that underlies lateral plate (i.e., armor) formation in
threespine stickleback is
Ectodysplasin
(
Eda
). The ancestral
allele for
Eda
is found in marine stickleback and results in
robust armor. A (relatively) new allele for
Eda
is found in
freshwater stickleback and results in reduced armor. The
amount of armor has been related to predation pressure →
heavy armor is advantageous in marine habits with fish and
bird predators, while reduced armor is advantageous in
freshwater habits with insect predators.
In Italy, germination of
Arabidopsis thaliana
(a plant) mainly occurs during November. Seeds that
germinate earlier or later have low fitness and usually don’t survive.
Picture credit: Dave Hone
Picture via:
https://portal.ct.gov/DEEP/Fishing/Freshwater/Freshw
ater-Fishes-of-Connecticut/Threespine-Stickleback
PRACTICE QUESTIONS: Mechanisms of Evolution & Modes of Selection
Spring 2023
©Juanita Diaz 2023
Each of the following scnarios is an example of sexual selection. Determine whether each of the
scenarios is a result of intrasexual selection or intersexual selection.
Female seahorses with larger body sizes are more attractive to males (and more likely to be chosen as
mates) than females with smaller body sizes.
Male birds of paradise have elaborate courtship dances
and plumage to attract females.
Female wattled jacana birds use their large size and spurs
to fight other females for access to breeding territory and
to protect their eggs.
Male elk use their antlers to fight other males for access to territory and mates.
Picture credit: Tim Laman
Picture via:
https://www.youtube.com/watch?v=oxwDsGRnBjs
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Q3: For a new mutation arising in the human BRCA1 gene (designated BRCA1-A4), there
is a linked allele, RS651118 ~150,000bp away on the same chromosome. Assume
recombination rate (r) is 1% for every megabase. After 25 generations, what is the
estimated linkage disequilibrium, D, observed between these two alleles? How much
has D changed? Use five decimal places in your calculations.
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%3D
14/15
What is the WORST question for a farmer to ask when determining whether or not to
grow transgenic plants?
Will the transgenic
Will the transgenic
plant help to
Will the transgenic
plant offer any
Will the transgenic
plant require more
pesticides?
plant help the
farmer to produce
information in
increase the food
studying human
genes?
supply?
more clones?
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Helpp 2
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Activity 3
In groups, discuss the following question then write your conclusions into your
note book In the pea plant, the characteristic of purple (P) flowers is dominant over
white (p) while The color of the green pods (G) is dominant over yellow (g). Pollina-
tion was carried out between two plants, both purple and green pods and hybrid.
1) Write the genotypes of the parents.
2) Write the genotypes of the gametes, and check their number using the fol-
lowing code: The number of types of gametes = 2n, where 'n' is the hybrid
traits.
3) Write the genotypes and the phenotype of first generation individuals.
4) Calculate the probability of the appearance of the following models: (1)
Genotype (Ppgg). (2) Phenotype, Form (Green Purple).
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Helpp 3
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Need urgent help with bio!!
2) Explain with both proper terminology and a punnett square, why it is not possible for two white pea flowers (white is a recessive trait) could produce a purple flower.
3) Explain with both proper terminology and a punnett square why recessive traits can remain “hidden” in generations. Be sure to explain the difference between phenotype and genotype.
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please help asap! thanks
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please help with this question asap thanks! solve all
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18
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Please help me with this question urgently??
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Task # 4 Genotypes and Phenotypes: The Mc1r gene is located on chromosome #16
in mice. Mice are diploid so every somatic cell has two copies of the Mc1r gene. Since
there are two Mc1r alleles there are three possible genotypes: MM, Mm and mm.
M-dark pigment m=less pigment
Parental generation: an inland mouse (MM) mates with a beach mouse (mm)
A. What is the genotype of the F1 offspring?
B. If this trait exhibits simple (Mendelian) dominance, circle the phenotype expected for
the F1 fur color: dark pigment / medium pigment / less pigment
Observed phenotype: F1 actually have medium pigment. Initially this looks like blending,
but it is not. M and m are discrete units. This observation does not disprove Mendel's
First Law which holds true for the genotypes. Individuals with genotype Mm produce
more pigment than individuals with genotype mm and less than individuals with
genotype MM.
and show the gametes and offspring
C. Write the F1 x F1 cross
in a Punnett square below.
X
D. What…
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Q89. Explain why evolution would favor the emergence of new incompatibility alleles, making the gene increasingly polymorphic in populations of tomatoes or petunias.
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Problem 1) Tay-Sachs disease is caused by loss of function mutation in a gene on chromosome 15 that codes for an enzyme. The disease is an inherited autosomal recessive condition which is found amongst Ashkenazi Jews of Central European origin. In this population, 2 in 4,900 children are born with the disease. What proportion of the population are carriers (heterozygotes) for this disease?
Problem 2) Skin colour in dolphins is determined by a single gene showing incomplete dominance giving rise to 3 phenotypes Brown, Pink & White. A survey of a large population of dolphins was carried out and the phenotypes recorded. However a student who had some of the data stored on their phone fell overboard and unfortunately the data was lost. The only data saved was that the brown homozygous dominants (BB) were 64% of the population .
a) What would be the percentage of pink heterozygotes and white homozygotes?
b) What percentage of the gametes that give rise to the next…
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11 del
156 Chapter 13
Mutations are
the source
of all change.
? QUESTION
Kaybee Kauffer.
3. If a rabbit with the defective gene is not fed plants with the pigment,
what color is its fat?
Can you see how the environment influences the expression of a trait?
4. What is different about a gene that creates albino color?
5. Describe the variation in the appearance among individuals in a
population when a trait is single-gene controlled compared to a trait
that is multiple-gene controlled.
Mutations
A mutation is a change in the sequence of nucleotides in the gene
(DNA). A gene can be mutated (changed) by radiation, chemicals in the
environment, or other spontaneous events that are surprisingly common
on this planet.
1. Which amino acid is supposed to be lined up at codon 6?
(Hint: Refer to the table in Exercise #2.)
Glutamic Acid
GAA
10 na na na na na na na nangy
W
Codon 6
2. What would happen if a mutation in DNA changed codon 6 in the
mRNA to GUA? (This one nucleotide substitution creates…
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30
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Question:-
Which characteristics would you expect to be indicativeof horizontal gene transfer?T / F A significant change in %GC in part of the genome of an organismT / F Deletions of gene in the genomeT / F An insertion of a stretch of DNA when aligning sequences from closely related speciesT / F Missing genomic DNA sequences when aligning sequences from closely related speciesT / F Duplications of genes in parts of the genome
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urgent need help asap
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Help 2
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asap
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Problem 2) Skin colour in dolphins is determined by a single
gene showing incomplete dominance giving rise to 3 phenotypes
Brown, Pink & White. A survey of a large population of dolphins
was carried out and the phenotypes recorded. However a student
who had some of the data stored on their phone fell overboard and
unfortunately the data was lost. The only data saved was that the
brown homozygotes (BB) were 59% of the population .
a) What would be the percentage of pink heterozygotes and white
homozygotes?
b) What percentage of the gametes that give rise to the next
generation of dolphins in this population will contain the white W
allele?
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PLease help, double and triple check your answers, im using this to study, these questions are NOT graded they are PRACTICE problems
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Preparation Assignment- Chapter 10
11. The discovery of chromosome banding in eukaryotes has greatly improved our ability to distinguish
various cytogenetic events. Particularly useful are "banding" polymorphisms because the "morphs"
can be used as chromosome markers. (These morphs are forms of chromosome that are
cytologically distinguishable by virtue of minor variations in band size, position, etc). Let's consider
chromosome 21 in humans. Assume that one set of parents are: 21ª21 (female) x 21°21ª (male),
where a, b, c and d represent "morphs" of a polymorphism for this chromosome.
In each case: State the genetic term for the condition (if possible), diagram the event(s) that gave
rise to the condition, and state in which individual the event(s) took place.
d. 42
21ª 1º + XX
Interphase [show condensed]:
Diagram
meiosis for
chromosome 21
in Mom (left)
and Dad (right)
After DNA replication:
After Meiosis I:
Interphase [show condensed]:
Gametes:
After DNA replication:
After Meiosis I:…
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Need help
1a. The blue gene 'Abd-B' in Drosophilais is [homologous] to blue #9 gene in Mus musculus?
A. orthologous
B. paralogous
C. analogous
1b. Is the yellow gene 'Antp' in Drosophila more related (have higher similarity of genetic sequence) with the orange gene 'Scr' in Drosophila or with the yellow gene '#6' in any of the Hox clusters in Mus musculus
A. there is not enough information to make this determination
B. yellow gene '#6' in any of the Hox clusters in Mus musculus
C. orange gene 'Scr' in Drosophila
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8
Q Search
8 Bb Bb Bb
616033?X-Blackboard-S3-Bucket-learn-ap-southeast-2-prod-fleet01-xythos&X-Blackboard-Expiration=1682402400000&X-Blackb
12 / 26
Reserve for analysis
using agarose gel
electrophoresis (250ng)
- 100% + B
Elective Ideas
Activity 1: Digestion of Genomic DNA with Hpall or Mspl
Water
1μg genomic DNA
20 units of Mspl per ug DNA
Reaction volume 20μl
Hpall OR Mspl*
Digest 90 mins 37°C
Take 500ng of digested DNA
Sequencing adaptor final concentration
0.5 or 1μM
Ligation reaction 10 mins
Reaction volume 20μl
Take 50ng, PCR reaction
Column-based purification of PCR products
Nanodrop quantification of products
Analyse up to 200ng
using agarose gel
electrophoresis
Reaction components
gDNA
Table 2 Restriction endonuclease digest of genomic DNA
Restriction endonuclease
buffer
b
1μg genomic DNA
20 units of Hpall per pg DNA
Reaction volume 20μl
Digest 90 mins 37°C
Take 500ng of digested DNA
Sequencing adaptor final concentration
0.5 or 1μM
Ligation reaction 10 mins
Reaction volume…
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U JUmething new.
umpulate genes focusing on the physical traits among
Ang can be used
value or can tileate
NDII. TIS helude selective breeding, hybridization and inbreeding.
3. Genetic engineering is referred to various techniques used for the modification or manipulation of
organisms through the processes of heredity and reproduction.
4. This includes cloning, gene splicing, gel electrophoresis and DNA recombinant technology.
5. Recombinant DNA technology use to remove and insert genetic sequences from and into other sequences
of other organism.
6. The tools used in Recombinant DNA technology are restriction enzymes, vectors and host organisms.
A sot
Tist in which
pnces
the
Ond bislistice. In
ex ternal DANA into +
trans yertion To
Hed int
GE
Activity 3
org
SOR
Directions. Distinguish the techniques in genetic engineering as based on the situation and examples given.
Write the letter of the choices.
A. Artificial selection
B. Selective breeding
C. Hybridization
D. Inbreeding
E. Cloning…
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ALL WORKING MUST BE SHOWN
Problem 3)
Butterflies show 3 phenotypes due to incomplete dominance at the
D locus with alleles D' and DB giving green phenotype in
heterozygotes and yellow and blue in homozygotes
a) A population of butterflies showed 49% yellow, and 51% blue
and green. What percentage of the gametes for the next generation
would contain the DB allele?
b) In another population only 1% of the butterflies are blue, What
is the DY allele frequency?
c) If the butterflies were subject to predation by birds that could
easily detect blue & yellow individuals what effect would you
expect this to have on the genotype and allele frequencies over
time? Indicate possible percentages.
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Please help me?? urgently needed
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Relate the importance of the large poputations of studies in 2012: The 1000 genomes project using as genomic landmarks Single nucleotide polymorphisms (SNPs)
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3-8 Relate the idea of the effects of shifting environments on fitness to the recent concerns
about bacterial resistance in medicine.
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Problem 4) About 7% of men in a population are red-green
colour blind due to a sex-linked recessive gene. Assuming random
mating in the population with respect to colour blindness;
a) What percentage of women would be expected to be colour
blind?
b) What percentage of women would be expected to be
heterozygous?
c) What percentage of men would be colour blind in the next
generation?
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