Biochemistry
6th Edition
ISBN: 9781305577206
Author: Reginald H. Garrett, Charles M. Grisham
Publisher: Cengage Learning
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Textbook Question
Chapter 22, Problem 10P
Understanding Enzyme Mechanisms Related to Pyruvate Carboxylase
Based on the mechanism for pyruvate carboxylase (Figure 22.3), write reasonable mechanisms for the reactions that follow:
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Chapter 22 Solutions
Biochemistry
Ch. 22 - Prob. 1PCh. 22 - Prob. 2PCh. 22 - Prob. 3PCh. 22 - Prob. 4PCh. 22 - Prob. 5PCh. 22 - Prob. 6PCh. 22 - Prob. 7PCh. 22 - Prob. 8PCh. 22 - Prob. 9PCh. 22 - Understanding Enzyme Mechanisms Related to...
Ch. 22 - Understanding the Mechanisms of Reactions Related...Ch. 22 - Prob. 12PCh. 22 - Prob. 13PCh. 22 - Prob. 14PCh. 22 - Prob. 15PCh. 22 - Prob. 16PCh. 22 - Prob. 17PCh. 22 - Prob. 18PCh. 22 - Prob. 19PCh. 22 - Prob. 20PCh. 22 - Prob. 21PCh. 22 - Prob. 22PCh. 22 - Using the ActiveModel for aldose reductase,...
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- Extending the Mechanism of Methylmalonyl-CoA Mutase to Similar Reactions Based on the mechanism for the methylmalonyl-CoA mutase (see problem 14), write reasonable mechanisms for the following reactions shown.arrow_forwardUnderstanding the Mechanism of the 3-ketosphinganine Synthase Reaction Write a reasonable mechanism for the 3-ketosphinganine synthase reaction, remembering that it is a pyridoxal phosphate-dependent reaction.arrow_forwardUnderstanding the Oxidation of Glucose and Its Products in the TCA Cycle Glycolysis, the pyruvate dehydrogenase reaction, and the TCA cycle result in complete oxidation of a molecule of glucose to CO2. Review the calculation of oxidation numbers for individual atoms in any molecule, and then calculate the oxidation numbers of the carbons of glucose, pyruvate, the acetyl carbons of acetyl-CoA. and the metabolites of the TCA cycle to convince yourself that complete oxidation of glucose involves removal of 24 electrons and that each acetyl-CoA through the TCA cycle gives up 8 electrons.arrow_forward
- The Effect of lodoacetic Acid on the Glyceraldehyde-3-P Dehydrogenase Reaction (Integrates with Chapters 4 and 14.) How might iodoacetic acid affect the glyceraldehydes-3-phosphate dehydrogenase reaction in glycolysis? Justify your answer.arrow_forwardStructure, function, Oxidative decarboxylation of pyruvate reactions and mechanisms of activity regulation of pyruvatedehydrogenase multi-enzyme complex.arrow_forwardBased on the action of thiamine pyrophosphate in catalysis of the pyruvate dehydrogenase reaction, suggest a suitable mechanism for the fourth step in the pyruvate decarboxylase reaction in yeast:arrow_forward
- Show that the free energy change for the succinate dehydrogenase reaction catalyzed by Complex II is insuffi cient to drive ATP synthesis under standard conditions.arrow_forwardWhen regulating phosphofructokinase, why is there such extensive regulation of this reaction and enzymatic reactions, in general?arrow_forwardNormal carbonic anhydrase has zinc at its active site . Suggest a structural reason why carbonicanhydrase synthesized with Ni²⁺, Fe²⁺, or Mn²⁺ in place of Zn²⁺ gives an enzyme with less catalytic efficiency.arrow_forward
- Considering the fatty acids: (a) Arachidic acid (C20H40O2); molar mass = 312.5 g/mol) (b) Palmitoleic acid (C16H30O2); molar mass = 256.4 g/mol). How many cycles of β -oxidation are needed for complete oxidation? How many molecules of acetyl CoA are formed from its complete catabolism? How can you calculate the number of molecules (moles) of ATP formed (net) by the complete catabolism of each fatty acid? and the number of moles of ATP formed per gram of each fatty acid metabolized??arrow_forwardATP is an ALLOSTERIC INHIBITOR of the phosphofructokinase enzyme, which is a key catalyst for one of the first steps of Glycolysis. Citrate (citric acid) is a 6-carbon product of the first reaction of the Krebs Cycle (aka Citric Acid Cycle). Interestingly, Citrate enhances the inhibitory effect of ATP on phosphofructokinase. What is a likely explanation for the inhibitory effects of these molecules? Excess ATP and Citrate signal the cell that Glycolysis should be speeded up. Excess ATP and Citrate signal a positive feedback loop. Excess ATP and Citrate signal the cell that Glycolysis should be slowed. Excess ATP and Citrate compete for the active site of phosphofructokinase.arrow_forwardMalonate competes with succinate in the succinate dehydrogenase reaction. Explain why increasing the oxaloacetate concentration can overcome malonate inhibition.arrow_forward
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