Genetics: From Genes to Genomes, 5th edition
5th Edition
ISBN: 9780073525310
Author: Leland H. Hartwell, Michael L. Goldberg, Janice A. Fischer, Leroy Hood, Charles F. Aquadro
Publisher: McGraw-Hill Education
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Chapter 21, Problem 21P
Suppose a GWAS investigation found a particular LD block to be associated with people’s preference for chocolate or vanilla ice cream. How could you identify the specific gene within this region of the genome whose alleles help determine this preference?
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Suppose a GWAS investigation found a particular LDblock to be associated with people’s preference forchocolate or vanilla ice cream. How could you identify the specific gene within this region of the genomewhose alleles help determine this preference?
Comparisons between human and chimpanzee genomes indicate that a gene that may function as a wild-type or normal gene in one primate may function as a disease-causing gene in another [The Chimpanzee Sequencing and Analysis Consortium (2005). Nature 437:69–87]. For instance, the PPARG locus (regulator of adipocyte differentiation) is a wild-type allele in chimps but is clearly associated with Type 2 diabetes in humans. What factors might cause this apparent contradiction? Would you consider such apparent contradictions to be rare or common? What impact might such findings have on the use of comparative genomics to identify and design therapies for disease-causing genes in humans?
What is the first step in quantifying the relative amounts of mRNA in different tissues? Would this method be useful in determining which immune system genes might be over-expressed in severe Covid cases? Why or why not?
Could quantitative PCR, which uses a DNA-binding dye, to show how many copies of the target DNA sequence could be used to quantify the amount of mRNA in a cell? Would you expect that a metabolically active tissue such as the liver would show more cDNA copies in such a method, compared to less metabolically active tissues such as skin cells?
One reason that the types and amounts of mRNAs are quantified in different tissue types is to compare which genes are activated and which are inactive. It used to be thought that any gene that was transcribed was automatically translated. The discovery of RNA-degrading systems shows that the real situation in cells is more complemented. Do you believe that a larger amount of mRNA of a given type, say for alpha hemoglobin in…
Chapter 21 Solutions
Genetics: From Genes to Genomes, 5th edition
Ch. 21 - Choose the best matching phrase in the right...Ch. 21 - Prob. 2PCh. 21 - How can each of the following be used in...Ch. 21 - Which of the following statements would be true of...Ch. 21 - Prob. 5PCh. 21 - Prob. 6PCh. 21 - Prob. 7PCh. 21 - Human geneticists have found the Finnish...Ch. 21 - Prob. 9PCh. 21 - Prob. 10P
Ch. 21 - In a certain plant, leaf size is determined by...Ch. 21 - Compare and contrast the use of SNP genotyping: i...Ch. 21 - Prob. 13PCh. 21 - Prob. 14PCh. 21 - Canavan disease, caused by homozygosity for a...Ch. 21 - Prob. 16PCh. 21 - Prob. 17PCh. 21 - Consider the triangle diagram shown in Fig. 21.15....Ch. 21 - Prob. 19PCh. 21 - Prob. 20PCh. 21 - Suppose a GWAS investigation found a particular LD...Ch. 21 - In domesticated dogs, size has a high...Ch. 21 - Prob. 23P
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- Most black bears (Ursus americanus) are black or brown in color. However, occasional white bears of this species appear in some populations along the coast of British Columbia. Kermit Ritland and his colleagues determined that white coat color in these bears results from a recessive mutation (G) caused by a single nucleotide replacement in which guanine substitutes for adenine at the melanocortin-1 receptor locus (mc1r), the same locus responsible for red hair in humans (K. Ritland, C. Newton, and H. D. Marshall. 2001. Current Biology 11:1468–1472). The wild-type allele at this locus (A) encodes black or brown color. Ritland and his colleagues collected samples from bears on three islands and determined their genotypes at the mc1r locus: Genotype Number AA 42 AG 24 GG 21 a. What are the frequencies of the A and G alleles in these bears? b. Give the genotypic frequencies expected if the population is in Hardy– Weinberg equilibrium. c. Use a chi-square test to compare the number of…arrow_forwardWhy are mutations in the INK4 locus so dangerous?arrow_forwardLet's say: a drosophila melanogaster line is bred in a lab, which has a phenotypic variation of interest resulting from the wingless gene (wg1) . Firstyly: how you would go about identifying SNP variants in this gene? and Secondly: what method could you use to eliminate the possibility that this phenotype results from other gene regulatory elements?arrow_forward
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An Introduction to the Human Genome | HMX Genetics; Author: Harvard University;https://www.youtube.com/watch?v=jEJp7B6u_dY;License: Standard Youtube License