Genetics: From Genes to Genomes, 5th edition
5th Edition
ISBN: 9780073525310
Author: Leland H. Hartwell, Michael L. Goldberg, Janice A. Fischer, Leroy Hood, Charles F. Aquadro
Publisher: McGraw-Hill Education
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Chapter 11, Problem 6P
The enzyme micrococcal nuclease can cleave phosphodiester bonds on single- or double-stranded DNAs, but DNA that is bound to proteins is protected from digestion by micrococcal nuclease. When chromatin from eukaryotic cells is treated for a short period of time with micrococcal nuclease and then the DNA is extracted and analyzed by electrophoresis and ethidium bromide staining, the pattern shown in lane A on the following gel is found. Treatment for a longer time results in the pattern shown in lane B, and treatment for yet more time yields that shown in lane C. Interpret these results.
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A piece of DNA is cut into four fragments as shown below. A solution containing the four fragments is placed in a single well at the top of an agarose gel. Using the information given below, draw (below the well) how you think the fragments will be aligned on the gel following electrophoresis. Label each fragment with its corresponding letter. Remember, each band on the gel will be the same width, equal to the width of the well at the top of the gel. These should all be in one lane.
What is it about the chemistry of DNA that causes it to be uniformly negatively charged?
A piece of DNA is cut into four fragments as shown below. A solution containing the four fragments is placed in a single well at the top of an agarose gel. Using the information given below, draw (below the well) how you think the fragments will be aligned on the gel following electrophoresis. Label each fragment with its corresponding letter. Remember, each band on the gel will be the same width, equal to the width of the well at the top of the gel. These should all be in one lane.
What if you had two different DNA fragments that were exactly the same length as measured in base-pairs. Would it be possible to distinguish them using this type of electrophoresis? How would they appear on a gel?
A piece of DNA is cut into four fragments as shown below. A solution containing the four fragments is placed in a single well at the top of an agarose gel. Using the information given below, draw (below the well) how you think the fragments will be aligned on the gell following electrophoresis. Label each fragment with its corresponding letter. Each band on the gel will be the same width, equal to the width of the well at the top of the gell. These should be in one lane.
Do smaller or larger (pb) fragments migrate the furthest? Why?
Chapter 11 Solutions
Genetics: From Genes to Genomes, 5th edition
Ch. 11 - For each of the terms in the left column, choose...Ch. 11 - Many proteins other than histones are found...Ch. 11 - What difference is there in the compaction of...Ch. 11 - What is the role of the core histones in...Ch. 11 - a. About how many molecules of histone H2A would...Ch. 11 - The enzyme micrococcal nuclease can cleave...Ch. 11 - a. What letters are used to represent the short...Ch. 11 - About 2000 G bands are visible in a...Ch. 11 - Suppose you performed a fluorescence in situ...Ch. 11 - Which of the following would be suggested by a...
Ch. 11 - For each of the following pairs of chromatin...Ch. 11 - a. Drosophila b. Humans Give examples of...Ch. 11 - One histone modification that is seen consistently...Ch. 11 - Drosophila geneticists have isolated many...Ch. 11 - On the following figures, genes A and B are on the...Ch. 11 - Prob. 16PCh. 11 - The human genome contains about 3 billion base...Ch. 11 - Prob. 18PCh. 11 - Prob. 19PCh. 11 - Prob. 20PCh. 11 - Prob. 21PCh. 11 - If you are comparing the two telomeres in each...Ch. 11 - a. What DNA sequences are commonly found at human...Ch. 11 - Prob. 24PCh. 11 - Prob. 25PCh. 11 - Prob. 26PCh. 11 - Give at least one example of a chromosomal...Ch. 11 - a. Give at least three examples of types of...Ch. 11 - A number of yeast-derived elements were added to...Ch. 11 - Prob. 30P
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- When chromatin is treated with non-specific nucleases, what is the length of the resulting pieces of DNAarrow_forwardAll of the following are examples of materials that are bound by your purifying medium during the DNA extraction process, except: O endoplasmic reticulum extraneous DNA O Calcium (Ca2+) O Iron (Fe2+) O Magnesium (Mg2+) O lipid membranesarrow_forwardTRUE OR FALSE a) The long solenoid structure of the chromatin material binds to a protein scaffold through the SARs or MARs in the DNA. b) There can be a quantitative determination of the degree of supercoiling in a DNA sample.arrow_forward
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- There are 6 parts to this question: This is a follow up to the prior question regarding the replication of the DNA strand below. The DNA strand is here for your reference and you do not need to do anything with or to it. TC GATATCGG AGCTATAGCC c) what enzyme separated the parental DNA template strands, d) what bonds were broken? e) what enzyme replicates DNA f) before DNA can be replicated/copied, what must be laid down to allow the enzyme in "e" to replicated the DNA (be specific)? g) our DNA is replicated in many "pieces", what enzyme connects these many "pieces" into one continuous DNA strand that becomes the sister chromatid? h) during what specific phase of the cell cycle does this DNA replication process occur? (This should be a review question from last topics we covered).arrow_forwardLook at the double-stranded segment of DNA shown below. Imagine that the two strands have already been denatured, and the temperature has been decreased to an appropriate annealing temperature. Show where the two primers would anneal to the strands, then indicate the direction of extension on each new strand with an arrow. 5’--T C A G G A C G T A A G C T T G C A T A T C T C G A T G C T A A A T C A T—3’ 3’--A G T C C T G C A T T C G A A C G T A T A G A G C T A C G A T T T A G T A—5’ Primer #1: 3’ A C G A T T T 5’ Primer #2: 5’ G G A C G T A 3’arrow_forwardWhat is/are the attributes that make nucleotide excision repair (NER) and base excision repair (BER) similar and/or different from each other? Select the correct response: The NER pathway is the only one that can remove DNA lesions in the strand regardless of their size which is followed by attaching the correct strand, then sealed by a DNA ligase. They both use the enzyme DNA glycosylases that recognizes the damaged DNA segments and proceed with repairing the faulty base in the strand. They differ NER only repairs purine bases while BER repairs pyrimidine bases. They both remove the damaged parts of the DNA where the BER pathway corrects only the identified damaged bases which are usually non-bulky lesions. The NER pathway, on the other hand, repairs the damage by removal of bulky DNA adducts which is a short-single stranded DNA segment. They both utilize the enzyme photolyase to reverse the damages created by the faulty section of the DNA. They both remove the damaged parts of the…arrow_forward
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