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Concept explainers
a.
To determine:
The ways by which Id gene functions if it acts as a repressor.
Introduction:
Myogenic differentiation (MyoD) is a transcriptional activator which triggers the expression of muscle-specific genes. It helps in the regulation of muscle differentiation. The Id gene is a protein that inhibits the action of MyoD.
b.
To determine:
The function of Id gene as an indirect repressor.
Introduction:
A repressor is a DNA or RNA binding protein. It inhibits the expression of one or more genes by binding with the operator. It blocks the attachment of RNA polymerase to the promoter and prevents the gene transcription.
c.
To determine:
The ways by which the amino acid sequence of the Id protein sustain the Id gene as a repressor and indirect repressor.
Introduction:
Transcription is the first process in gene expression in which the information present in double-stranded DNA is copied in a molecule of single-stranded mRNA. The process involves three steps, initiation, elongation, and termination.
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Chapter 16 Solutions
Genetics: From Genes to Genomes, 5th edition
- Transcriptional repressor proteins (e.g., lac repressor), antisense RNA, and feedback inhibition are three different mechanisms that turn off the expression of genes and gene products. Which of these three mechanisms will be most effective in each of the following situations? A. Shutting down the synthesis of a polypeptide B. Shutting down the synthesis of mRNA C. Shutting off the function of a protein For your answers to parts A–C that list more than one mechanism, which mechanism will be the fastest or the most efficient?arrow_forwardIf the lacl gene is mutated so that the repressor protein no longer binds to lactose, what will be the effect on the expression of B-galactosidase in lactose's presence and absence? Explain. If the promoter for lacl is mutated so that the expression of the repressor increases, what will be the effect on the expression of B-galactosidase in the presence and absence of lactose? Explain. D. (Extremely tricky question!) Describe the behavior of the lac operon assuming that the lacl gene has been mutated so that the repressor now binds to DNA in the presence of lactose but cannot bind to DNA in the absence of lactose.arrow_forwardDiscuss the following argument: “if the expression of every gene depends on a set of transcription regulators, then the expression of these regulators must also depend on the expression of other regulators, and their expression must depend on the expression of still other regulators, and so on. cells would therefore need an infinite number of genes, most of which would code for transcription regulators.” how does the cell get by without having to achieve the impossible?arrow_forward
- Now read this abstract from a 2013 journal article What is the authors' explanation of how Gal80p works? Note UASG from the question above is the same as UASGAL The DNA-binding transcriptional activator Gal4 and its regulators Gal80 and Gal3 constitute a galactose-responsive switch for the GAL genes of Saccharomyces cerevisiae. Gal4 binds to GAL gene UASGAL. (upstream activation sequence in GAL gene pro- moter) sites as a dimer via its N-terminal domain and activates transcription via a C-terminal transcription activation domain (AD). In the absence of galactose, a Gal80 dimer binds to a dimer of Gal4, masking the Gal4AD. Galactose triggers Gal3-Gal80 interaction to rapidly initiate Gal4-mediated transcription activation. Just how Gal3 alters Gal80 to relieve Gals0 inhibition of Gal4 has been unknown, but previous analyses of Gal80 mutants suggested a possible competition between Gal3-Gal80 and Gal80 self-association interactions. Here we assayed Gal80-Gal80 interactions and tested for…arrow_forwardWhat role does an operator sequence serve in bacterial gene expression regulation? Describe one change in bacterial cells that can cause a repressor protein to go from inactive to active or from active to inactive.arrow_forwardUnderstanding why these receptors are present when they are not supposed to be is important in finding new treatments for Cushing's syndrome. When the sequences for the promoters for the receptor genes were analyzed there was no common sequences found. This led to the theory that the loss of methylation of cytosine in the promoters of these genes was leading to their inappropriate expression. How could the loss of cytosine methylation lead to overexpression of the receptor genes? O a. Increased histone acetyltransferase activity O b. Decreased histone deacetylase activity Oc Decreased histone acetyltransferase activity O d. Increased histone deacetylase activityarrow_forward
- a) hours: 0 2 567 DMC1 SPS1 hours: 0 2 5 6 7 9 11 DIT1 SPS100 Oxygen level (% normal) b) 120 100 FIGURE 4.6. Comparison of Northern blots with DNA microarray data. a) Results from four individual Northern blots examining four different genes and measuring mRNA production over time, as indicated. b) Results from a series of microarrays for the same four genes of interest. Note the color scale on the bottom of b), where bright green indicates a 20-fold repression and bright red indicates a 20-fold induction. Black indicates no change in transcription (i.e., the merged microarray spot would have appeared yellow). 80 60 40 20 0 1 2 gene X gene Y gene Z 3 1 hour 1.0 1.0 b) 1.0 hours: 0.5 2 5 7 9 11 DMC1 SPS1 DIT1 SPS100 fold repressed >20 10x 3x3x10x >20 1:1 fold induced 4 5 6 7 8 9 10 11 Time (hours) 3 hour 2.2 4.5 1.5 5 9 hour hour 1.0 0.15 0.95 0.05 2.0 2.0 FIGURE 4.7 Transcriptional response of three genes to the gradual loss of oxygen. a) Graph of oxygen con- sumption over time by…arrow_forwardYour investors are concerned that the GasP protein might not be sufficiently produced under normal laboratory conditions. They suggest controlling the transcription of the gasP gene using a chemical that will “trigger” its transcription. a. What type of promoter could be used? b. What chemical will you use to control transcription? c. How does this method of control work?arrow_forwardProlactin is a protein hormone that, among other things, enables mammals to produced milk. Prolactin is secreted from cells in the pituitary gland in response to eating, mating, ovulation, and nursing. a. Prolactin is encoded by the PRL A segment of the PRL gene and its regulatory regions are shown below. The +1 site (*) and part of the promoter (#) of PRL are indicated. What is the PRL mRNA transcribed from the PRL gene? 5'-AAGCCGACCGGATATACGACGCCATGAACATGACAGGATCGCCATGG-3' 3'-TTCGGCTGGCCTATATGCTGCGGTACTTGTACTGTCCTAGCGGTACC-5' #### * b. What is the 5'-UTR of PRL? c. Using the mRNA you transcribed in part a, what are the first 8 amino acids of prolactin that are translated? cis face trans face MTOC Rough ER Golgi complex Cell membrane c. In what organelle is prolactin glycosylated? What motor protein would be used to transport prolactin from the rough ER to this organelle? d. Where does exocytosis occur? What motor protein would be used to transport prolactin from the site of its…arrow_forward
- Genes in both prokaryotes and eukaryotes are regulated by activators and repressors.a. Compare and contrast the mechanism of functionof a prokaryotic repressor (for example, Lac repressor) with a typical eukaryotic repressor protein(a direct repressor).b. Compare and contrast the mechanism of functionof a prokaryotic activator (for example, CAP) witha typical eukaryotic activator protein.arrow_forwardGive and briefly explain two examples of how gene expression may be repressed without altering the gene-coding sequence.arrow_forwardSome compounds called antiinducers bind to repressors such as the lac repressor and inhibit the action of inducers; that is, transcription is repressed and higher concentrations of inducer are required to induce transcription. Propose a mechanism of action for anti-inducers.arrow_forward
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